| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39759 |
|---|
| Symbol | ACOX2 |
|---|
| ID | 4851645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2437024 |
|---|
| End bp | 2439201 |
|---|
| Gene Length | 2178 bp |
|---|
| Protein Length | 725 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 640393353 |
|---|
| Product | Acyl-coenzyme A oxidase (Acyl-CoA oxidase) |
|---|
| Protein accession | XP_001386799 |
|---|
| Protein GI | 126275139 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.410007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.203181 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGT TGCCCAAAGA GCTCCAAGCT AACTCTACGC CCCAGATCAA GATCGATCCC
AAGAAGCCTC TGATCGTTAC GAATACCATT GATTCCGAAC CCCGTCCTAC ACCAGCCAAG
TCGATAGAGG AGGAAAGAAA CCGCACCAAC TGGGACACCG TCAAGATGCA CCAATTCCTC
GAAGGTTCGC CTGAAAAGTC GCTTGAGATC CTCAAGTTGT ACAAGTCGTT GGAAAGAGAC
ACTATCTTGC AGTCGTCCTT TGAGCACTAC GACAACACGA AAGACCAGGA CCGTGAGTTG
GTAGCCCAGA GAATTAACCA GATGACCAAG TTCATTGAGA TTGATTCGCC AAAAAAATTC
AGAAGAAGAT TGAACTTGAT GACCGTCTAT GATCCATCCA TGGGAATCAG AATTGCTGTC
AACTTGGGAT TGTTCCTCAA CTGTATCAGA GGGAACGGTA CCGCTGCCCA GTATGAGTTC
TGGGCCAAGC ACAGAGAATC CGCTATCATC AAGCAGATGT ATGGCTGTTT CGGGATGACT
GAATTGGGCC ACGGATCCAA TGTTGCTGGA TGTGAAACTA CTGCTACTTT TGATGAAGAA
ACAGACGAGT TTGTCATCGA CACTCCTAAC ATCAGTGCTA CCAAGTGGTG GATCGGAGGT
GCTGCCCATT CAGCTACTCA CAGTTCTGTT TATGCCAGAT TGATCGTCAA GGGTAAGGAC
TACGGTGTAA AATGCTTCAT TGTTCCATTG AGAGACTCCC AGCACAACTT GTGTCCTGGT
GTTGCTATCG GTGATATTGG CTCTAAGATG GGAAGACAGG GTGTGGACAA CGGCTGGATC
CAGTTTTCGG ACGTCAGAAT CCCTAGATTC TTCATGTTGC AGAAATGGTG CAAAGTTGAC
CGCCACGGTA ATGTGACCTT GCCTCCTTTG GAGCAATTGT CATACATCTC GTTATTGGGA
GGCAGAGTCG ACATGGCTGT GGACTCCTAC AGACAGGGTG CTAGATTCAT GACAATTGTG
CTCAGATACG CTGCAGGCAG AAAACAGTTC AAGCAAGAAG GCGCCAAAGT TGAAACTACC
GTTTTGGACT ATGCCAATGT GCAGAAGAGA TTGTTGCCTT ACCTTGCCTT GGTCTACGCC
ATGGCAGTTG GTACCGACAG ATTGGAAAAG CAGCACGAAC AGATCTTGGA ACAAATGGAT
AGGGCCATCC TTAACAACGA CAAGAACGGC ATCAACCAGT CACTCAACAG CACCAAGTCG
TTGTTTGTTG ATTCTGGTTC TTTGAAGTCC ACTTGCACGT GGTTAACGTC CTCCTTGATT
GACGAGTCAA GACAAGCCTG TGGTGGTCAT GGCTACTCCT CCTACAACGG TTTTGGCAAG
ACCTACAACG ACTGGGCTGT CCAATGTACT TGGGAAGGTG ACAACAACGT TCTTGGTATG
TCTGCTGGTA AGACTATCGT GAAGAACGTC CAGCAGATTC TCAAGGGCAA GACCATCAAG
TCATCTACGT TGGATTTCCT CAATAACGCT AAACAATTGT TGGACACAAA GAACATTCTC
GCAACTGAAG CTGACTTGAA GGACTCTTCC AAGTTCAGAG TTGCTCTACA AGCTGTCATT
GTCAAGTATG CTGCTTCATT GTCTGATGTC TTGGCCAAGA ACAAAAACAA CTGGGATTTG
GTCGGCGCCC TGAGAGTCGA GTTGTCAAAG TTGAGAGCCC ACTATTACTT GCTCGAGACG
TTTGAAGAAA GAGTAAAGTC ATTGAGTCCA GCCTCGGACT TGTACCCTCA CTTGGCCAAC
CTCTTGCAAT TGTACTACGT GTCTGTGATA CTCATTCCTT TTGCAGCTGA TTTCATCAGA
TTTGGCGTTA TCAGCTCCGA CTTGGTATAC TATGCTACTT CCGAGTACTT TGGTACCCTC
TGTGGTGCCG TCAGACCATA TGTCGTTGGT TTGACTGATT CGTTCCAACA ACCAGACAAC
TTCTTGAACT CGGCTATTGG TAAGTACGAC GGTAATATCT ACGAAAACTA CTTTGGTGTT
GTTAAGTCTG CCCATCCTCC AAGAAACGAT AAGGCTCCAT ACAATTCTGC TTTGACGGGA
ATGTTGAACA GACCTTCTCA GGAAGAAAGA GAAAGATTTG AGAAGTCTGC CGAAGCTGCC
AAGATATTGT CCCGCTAG
|
|---|
| Protein sequence | MILLPKELQA NSTPQIKIDP KKPLIVTNTI DSEPRPTPAK SIEEERNRTN WDTVKMHQFL
EGSPEKSLEI LKLYKSLERD TILQSSFEHY DNTKDQDREL VAQRINQMTK FIEIDSPKKF
RRRLNLMTVY DPSMGIRIAV NLGLFLNCIR GNGTAAQYEF WAKHRESAII KQMYGCFGMT
ELGHGSNVAG CETTATFDEE TDEFVIDTPN ISATKWWIGG AAHSATHSSV YARLIVKGKD
YGVKCFIVPL RDSQHNLCPG VAIGDIGSKM GRQGVDNGWI QFSDVRIPRF FMLQKWCKVD
RHGNVTLPPL EQLSYISLLG GRVDMAVDSY RQGARFMTIV LRYAAGRKQF KQEGAKVETT
VLDYANVQKR LLPYLALVYA MAVGTDRLEK QHEQILEQMD RAILNNDKNG INQSLNSTKS
LFVDSGSLKS TCTWLTSSLI DESRQACGGH GYSSYNGFGK TYNDWAVQCT WEGDNNVLGM
SAGKTIVKNV QQILKGKTIK SSTLDFLNNA KQLLDTKNIL ATEADLKDSS KFRVALQAVI
VKYAASLSDV LAKNKNNWDL VGALRVELSK LRAHYYLLET FEERVKSLSP ASDLYPHLAN
LLQLYYVSVI LIPFAADFIR FGVISSDLVY YATSEYFGTL CGAVRPYVVG LTDSFQQPDN
FLNSAIGKYD GNIYENYFGV VKSAHPPRND KAPYNSALTG MLNRPSQEER ERFEKSAEAA
KILSR
|
|---|
| |