Gene PICST_39006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_39006 
SymbolHAP3.1 
ID4851321 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1494004 
End bp1494435 
Gene Length432 bp 
Protein Length124 aa 
Translation table 
GC content37% 
IMG OID640393029 
ProductCCAAT-binding factor, subunit A (HAP3) 
Protein accessionXP_001387930 
Protein GI126274362 
COG category[B] Chromatin structure and dynamics 
COG ID[COG2036] Histones H3 and H4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.191665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0696406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CAACTTCGCC AGTAGACAAA GATTGGTTGA ACAACGACTA TGAGATCAAG 
GAACAAGACC GATTCCTTCC GATTGCCAAT GGTACGTCTT CTATAAGCAT TCATTCAATT
TTCCTTAACT TATGCTAACA CCATCTAGTC GGACGTGTGA TGAAAAAGGC TCTACCATCC
CACGCCAAAT TATCAAAAGA ATCCAAAGAA TGTGTCCAGG AATGTGTGTC TGAGTTTATA
TCTTTCATAA CCAGTCAGGC AGCAGACAAA TGTAAACTTG AAAAGAGAAA AACCCTAAAT
GGTGAAGATA TTCTCTGGTC AATGTATATC CTCGGTTTTG AAAATTATGC TGAGACTTTA
AAGATTTATC TAGCCAAATA CCGTCAAGTA AGTAATTACA CAACATTTTT CAAATGTCAA
GATCAATACT AA
 
Protein sequence
MSQPTSPVDK DWLNNDYEIK EQDRFLPIAN VGRVMKKALP SHAKLSKESK ECVQECVSEF 
ISFITSQAAD KCKLEKRKTL NGEDILWSMY ILGFENYAET LKIYLAKYRQ VSNYTTFFKC
QDQY