Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_39006 |
Symbol | HAP3.1 |
ID | 4851321 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 1494004 |
End bp | 1494435 |
Gene Length | 432 bp |
Protein Length | 124 aa |
Translation table | |
GC content | 37% |
IMG OID | 640393029 |
Product | CCAAT-binding factor, subunit A (HAP3) |
Protein accession | XP_001387930 |
Protein GI | 126274362 |
COG category | [B] Chromatin structure and dynamics |
COG ID | [COG2036] Histones H3 and H4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.191665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0696406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC CAACTTCGCC AGTAGACAAA GATTGGTTGA ACAACGACTA TGAGATCAAG GAACAAGACC GATTCCTTCC GATTGCCAAT GGTACGTCTT CTATAAGCAT TCATTCAATT TTCCTTAACT TATGCTAACA CCATCTAGTC GGACGTGTGA TGAAAAAGGC TCTACCATCC CACGCCAAAT TATCAAAAGA ATCCAAAGAA TGTGTCCAGG AATGTGTGTC TGAGTTTATA TCTTTCATAA CCAGTCAGGC AGCAGACAAA TGTAAACTTG AAAAGAGAAA AACCCTAAAT GGTGAAGATA TTCTCTGGTC AATGTATATC CTCGGTTTTG AAAATTATGC TGAGACTTTA AAGATTTATC TAGCCAAATA CCGTCAAGTA AGTAATTACA CAACATTTTT CAAATGTCAA GATCAATACT AA
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Protein sequence | MSQPTSPVDK DWLNNDYEIK EQDRFLPIAN VGRVMKKALP SHAKLSKESK ECVQECVSEF ISFITSQAAD KCKLEKRKTL NGEDILWSMY ILGFENYAET LKIYLAKYRQ VSNYTTFFKC QDQY
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