| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_38880 |
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| Symbol | SPT15 |
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| ID | 4851092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 909439 |
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| End bp | 910182 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640392800 |
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| Product | TATA-binding protein |
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| Protein accession | XP_001387406 |
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| Protein GI | 126274078 |
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| COG category | [K] Transcription |
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| COG ID | [COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.130977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.751023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTCTT TAAAGTTGCC TACAAATCCA GCTCAAGCCA AAGCTTTTAC TGCTCCAAAC
TCGTTGTTGT TCCCTCAAGG ATTTGATGGA GAAAACAAGC CAGTAGATGG TCAGCCTCAA
CCTGGCTCTC AGGAAATCAT TAAGAGCGAA CAGACTGCGG ACATTGTTGA ACCTAAGCAA
GAGGAAGATG ATGGTGCTAC TTCTGGTATT GTGCCAACGT TGCAGAATAT TGTTGCTACC
GTCAACTTGG ATTGTCGTTT GGATTTAAAA ACCATCGCAT TACATGCTCG TAATGCTGAA
TACAACCCAA AGCGTTTTGC CGCTGTTATC ATGAGAATTC GTGAACCAAA GACGACGGCT
TTGATTTTCG CTTCTGGTAA GATGGTTGTC ACTGGTGCTA AGTCTGAAGA TGATTCGAAA
TTGGCCTCAA GGAAGTACGC CAGAATTATT CAAAAGTTAG GTTTCAATGC TAAATTCACT
GATTTCAAGA TTCAGAATAT CGTCGGCTCG TGTGATGTCA AATTTCCTAT CAGATTGGAA
GGATTGGCAT TCTCACACGG AACTTTCTCG TCGTATGAAC CAGAATTATT CCCAGGGTTG
ATTTATAGAA TGGTGAAACC AAAGATTGTC TTGTTGATCT TCGTATCAGG CAAGATTGTG
TTGACTGGTG CCAAACAAAG AGAAGAGATT TATGCCGCTT TTGAATCGAT TTATCCGGTA
TTGAGTGAAT TCCGTAAGTC ATGA
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| Protein sequence | MDSLKLPTNP AQAKAFTAPN SLLFPQGFDG ENKPVDGQPQ PGSQEIIKSE QTADIVEPKQ
EEDDGATSGI VPTLQNIVAT VNLDCRLDLK TIALHARNAE YNPKRFAAVI MRIREPKTTA
LIFASGKMVV TGAKSEDDSK LASRKYARII QKLGFNAKFT DFKIQNIVGS CDVKFPIRLE
GLAFSHGTFS SYEPELFPGL IYRMVKPKIV LLIFVSGKIV LTGAKQREEI YAAFESIYPV
LSEFRKS
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