| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_38031 |
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| Symbol | |
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| ID | 4851362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1604985 |
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| End bp | 1606136 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393070 |
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| Product | predicted protein |
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| Protein accession | XP_001387539 |
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| Protein GI | 126274403 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGC GTAATAACAA GAAACTTCTC AACCAGATAT ATTCTCGCCC GCTTCCGATC
GAGTTGTCTT CTGACAAGTA CGGGGTGGCG ATGCCGACGT TGTTTCCACA TAATCCTGTT
TCGTGGCTCT TTTATTTAAC TAGATTGATT CAAGTAAATA CTTTGTATTC TGTCCCCCAG
TCTCTGGAGA CACTAATAGA CGTTAGCTAC GACTCTGATG GCATATTTAA GGTGCTGGAT
GAAGAGTCAA TGGCAAAATT GTGGAGATGC GGCTTTTTTG GGAAAGGTAC TCTCTCTAGA
TCAGAACCAA CGTGGAAGGC ACGTACCATC AAGAGATTGA ACTTGGACTC GAACACAGCC
AATGCTTTAT CGATGGAAGA AGTAACCAAC AAGAGACGAG ACGAGAGGAA GAAGTTCAAG
GCTGAAAGGT CTAGGCTCCA GGAACTCGAG CTTAAGCAAC GTAAGGGCGA AATTTCGGAT
CTAGAATCCT CACAGTTAGA ACAACTCAGA GAAACCCTAG CATCGCTCAG ATTGATCGAC
TTCAAATTGT CAAAAGATTC TTTTGATAGA GAAACAGACT TGAGGTTCGA GGATTTGGAT
CTAATAGAGT CCAACCAGCT TGGACGGAAC CTTGAATTCT TACAGTTGCA AGCCATAGAA
ACGTTCTTCT TGAAGTTTGC TGTCAACGTT ATCCGTGTAA ACGACTTTTC CACAAAGCAA
TTGTTTCTAG AATGTTGTCG TCAATCAGGA ATACTTAAGC CTACAAACAA GTTTGTTTTA
GATTATGTTG TATATCACCA TTATCGTTCG CTTGGATGGT GTGTGAGATC TGGAGTCAAA
TTCGGCTGTG ATATGTTGCT CTACAAAAGA GGTCCACCAT TTATCCATGC CGAGTATTGT
ATTTTGGTTA TTTCCAATGA TGATAAGGCA AGATACGACT GGTTTGAAAT GGCTGCGAAA
GCCAGAGTCA TCGGGACCGT GAAGAAAACC TTTGTGCTCG TGTACGTCGA TTCCCCGACA
GAAGAAAGGT TCAACTCGAT ATTGAGCAGC GCATATTCTG ACGAAGGTAT ACTCTTCCAG
GACTTGTTCA AGTTGTATAA AGTCACTGAA ATTCTTTACC GGAGATGGGC TCCTAGCAAG
ACTAGGGACT GA
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| Protein sequence | MSKRNNKKLL NQIYSRPLPI ELSSDKYGVA MPTLFPHNPV SWLFYLTRLI QVNTLYSVPQ
SLETLIDVSY DSDGIFKVLD EESMAKLWRC GFFGKGTLSR SEPTWKARTI KRLNLDSNTA
NALSMEEVTN KRRDERKKFK AERSRLQELE LKQRKGEISD LESSQLEQLR ETLASLRLID
FKLSKDSFDR ETDLRFEDLD LIESNQLGRN LEFLQLQAIE TFFLKFAVNV IRVNDFSTKQ
LFLECCRQSG ILKPTNKFVL DYVVYHHYRS LGWCVRSGVK FGCDMLLYKR GPPFIHAEYC
ILVISNDDKA RYDWFEMAAK ARVIGTVKKT FVLVYVDSPT EERFNSILSS AYSDEGILFQ
DLFKLYKVTE ILYRRWAPSK TRD
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