Gene PICST_37914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37914 
SymbolMCH4.3 
ID4851357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1583346 
End bp1584611 
Gene Length1266 bp 
Protein Length421 aa 
Translation table 
GC content43% 
IMG OID640393065 
Productmonocarboxylate permease 
Protein accessionXP_001387537 
Protein GI126274398 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTACTAGACG ATCCTGATAG ATTTCCAGAT GGTGGTTTCG AAGCCTATAG AGTTCTCTTG 
GGATCGTTTC TAGGCTTGAC TGGAGTATTG GCTTTTGTAA ATAGTGCTGG AGCTATAGAG
AACTACATAC TGAAGAATAT TCTTCCAGAT ACGCCAGTTT CTACTATAGG GTGGATATTT
TCCATCTACA ACTTCTGTGG ATTTGGTATG ACTTTGATCT CTGGACCTGT CTTTGACAAG
ATCGGATGTC GGATACCTCT TGTATTCGGT ACAGTGTTAA TGACCGTTGG ATTTATGTGT
GCTTCTTTGG CGACAGAGGT GTACCAGTTC GTCCTTGCCT ATGGCATCTG CGCTGGGATA
GGCACAGCTT TTACGTTTGG ACCATTTGTA GGAGTCTTGA CGCATTACTT TCTCAAAAAG
AGAGCCTTGG CTATCGGATC CGCCTATATA GGGGGTGCAA TAGGTGGTGC ATGTTTCCCC
GTAATGTTCA GATCATTGCT CCCGATGTTC GGCTTTGGTT GGTCGATCAG AATCGGAGCT
TTCATCTGCT TAGCATTGCT CACAGTAGGA ACTGCTTTGG TCAAAGATAG GCACAAGGAA
TTCAGCAGTA TAGACCCTAA TAGTAACGAA AGTGTAGTCA AGGAAATCTT CCGGTCTATC
GACTTTTCCA TCTTCAAGAA TCGAGTCTAT ACTTGTCTAG TTCTAGCCTT ATTGGGTAAT
GGTTTTGCAT TCTTGATCAC TATGACGTAC TTGCCATCTT ATGCAACCAC ATTTGGCTAC
TCTCAATCAG ACTCATACCT CTTGTTGGTG GTGTTCAACT CTTTTTCGAT TCCGGGAAGA
ATCATACCCT CTTATTTTGC TGACCATTAC GGCCGTTTTA ATGCCATCTG TTGTATTAGC
TCGATATCCA CTTTGGCATT TTGTCTCATC TGGCTCAACC GGCCAGCTGG ACACACTTTG
ACTGGGTTAT TTGTATTTGC AGGGTGCTTT GGATTCAGTT CTGGTTCCAT TTTGTCGCTT
ACACCAGCTC TGATAGGTCA AGTATTCAAA GTAGAGGAAA TCGGTAAGGG TATAGGAACT
GCTTTTTTTG TTCTCTCCTT CGGAGACTTG ATAGGTATTC CGATTGGTGG AGCTATAACT
AATCCTAAAA CAAGAGATTC TTTTGATTAT CTTGTACTTT TTGTTACTTT ATGTTCGGTT
GGTGGAACAG TTGGTTCATT TGGCGCTCGA TACCTCTATG CTGGAGTCAA GATGGCTCGT
GTATAA
 
Protein sequence
LLDDPDRFPD GGFEAYRVLL GSFLGLTGVL AFVNSAGAIE NYILKNILPD TPVSTIGWIF 
SIYNFCGFGM TLISGPVFDK IGCRIPLVFG TVLMTVGFMC ASLATEVYQF VLAYGICAGI
GTAFTFGPFV GVLTHYFLKK RALAIGSAYI GGAIGGACFP VMFRSLLPMF GFGWSIRIGA
FICLALLTVG TALVKDRHKE FSSIDPNSNE SVVKEIFRSI DFSIFKNRVY TCLVLALLGN
GFAFLITMTY LPSYATTFGY SQSDSYLLLV VFNSFSIPGR IIPSYFADHY GRFNAICCIS
SISTLAFCLI WLNRPAGHTL TGLFVFAGCF GFSSGSILSL TPALIGQVFK VEEIGKGIGT
AFFVLSFGDL IGIPIGGAIT NPKTRDSFDY LVLFVTLCSV GGTVGSFGAR YLYAGVKMAR
V