| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_37903 |
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| Symbol | UBP6 |
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| ID | 4850991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 649019 |
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| End bp | 650464 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640392699 |
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| Product | deubiquitinating enzyme |
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| Protein accession | XP_001387762 |
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| Protein GI | 126273952 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5207] Isopeptidase T |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.816359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTTTCTATCA AAAACGCTGG AAAGGTCTAC GACATTGAGC TTGAAGCTGA TGCCACGGGT
ATAGATTTCA AGCAAAAGAT CCAGGAATTG ACCAGTATTC CACCTAATAG ACAGAAAATC
TTAGTAAAAG GTGGAAAGGT CAATGATACT GACAATGTTT CTGCAATTGT AGCCAGTGCC
AAACAACCTA TCATGGTGTT GGGAACTCCC GACAAGAATC TTCCCTCAAA GCCCATAGAG
AAACAAGTTT TTTTGGAGGA TTTGAATCTG AACCAGTTGA CAAATGTGTC GAATGACCCT
TCAGGATTGG TGAATTTGGG GAACACGTGT TATTTAAACT CTTCGCTCCA GACCTTGTTT
AAAATTGAAG ATGTCAACAA GAAGGTTAGT CTGTATCAGG CTGGTAGATC TTCTGGTGTA
AGTCCAACCA ATGCCTTGGT CGTGGGTTTG AAAAGTTTAG TAGGTCAGAT GAGCAAGAAA
CAGGAGAAAG TTAATCCTAC TTTGTTTCTC GCTCTTTTTA GAAACCAATT CCCTCAATTC
GCTGAAAGAG ACAACCATGG CTTTTACAAG CAGCAGGATG CCGAAGAAGC CTTTTCACAG
ATCTTGCGGG TTTTATGTGA CGAATTGAAA ATAGAGGACT CGTTCAGACT CACGTTCAAT
ACCGATACCA AGTGTCTTGC CTTGCCTGAA GAAGAGCATG TTTTTGGCGT TGAGGAGTCA
CTCAAATTGA ACTGCCATAT CGACATCAAG ACCAACTTTC TCCGAGATGG CTTATTGGCC
GGATTGAAAG ATACCATGGA AAAATACAAT GATACATTAC AGAGCAATGC CGAGTACGAA
GTCTCGAAAA AGATCACCAG ATTGCCAAAG TACTTAACTG TTCACTTTGT CAGATTTTTC
TGGAGAAGAG ACACCCAGAA GAAGTCCAAA ATTCTCAGAA GAGTTCAATT TCCATTTGAG
TTGGACTTGT CAGAAATGTT GGATGATTCT ATAAAGTCTG ACAAGGTCAG TATCAGGGAC
CAGTTAAGAA AAATCGAAAA GGACAACTTA GATTTGATCC GGGACTTTAA GAAAGCTAAA
AAAGATACCA CATTGAACCC ATTAGAACAG CAGGAGGAAG ACGAGATGAA GTTGCTTTCA
ATCAAGTCCA AGTTTTCCGA CTCGTTTAAG TCCATTTTGC CTGAAGGCTT CAATGTAGAA
GAAACTTCTG AAAACCCTTC TTCTGTATAC GAGTTAAGTG CTGTAATCAC CCATGCTGGT
TCTTCTGCTG ATTCTGGCCA TTATCAGTCG TTTATCAAGG ATGATCTGGA TTTGGATGGT
GAAAGATGGT GGAAATTCAA CGATGACAAA GTCAGTTCCG TTAATAAGGA AAAGATCGAG
TCGTTGGCTG GAGGCGGTGA AAGTGACAGT GCCTTGATTT TGATCTACAA GGGACTTGGA
TTGTAG
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| Protein sequence | VSIKNAGKVY DIELEADATG IDFKQKIQEL TSIPPNRQKI LVKGGKVNDT DNVSAIVASA
KQPIMVLGTP DKNLPSKPIE KQVFLEDLNL NQLTNVSNDP SGLVNLGNTC YLNSSLQTLF
KIEDVNKKVS LYQAGRSSGV SPTNALVVGL KSLVGQMSKK QEKVNPTLFL ALFRNQFPQF
AERDNHGFYK QQDAEEAFSQ ILRVLCDELK IEDSFRLTFN TDTKCLALPE EEHVFGVEES
LKLNCHIDIK TNFLRDGLLA GLKDTMEKYN DTLQSNAEYE VSKKITRLPK YLTVHFVRFF
WRRDTQKKSK ILRRVQFPFE LDLSEMLDDS IKSDKVSIRD QLRKIEKDNL DLIRDFKKAK
KDTTLNPLEQ QEEDEMKLLS IKSKFSDSFK SILPEGFNVE ETSENPSSVY ELSAVITHAG
SSADSGHYQS FIKDDLDLDG ERWWKFNDDK VSSVNKEKIE SLAGGGESDS ALILIYKGLG
L
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