| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_37880 |
|---|
| Symbol | BET2.2 |
|---|
| ID | 4851554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2120503 |
|---|
| End bp | 2121492 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640393262 |
|---|
| Product | Type II proteins geranylgeranyltransferase beta subunit |
|---|
| Protein accession | XP_001387650 |
|---|
| Protein GI | 126274839 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5029] Prenyltransferase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.232433 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA CGGAGGAAGT AAAGGCGTTC TATAAAGAGA AGCATATTGC ATTTGTGGTA
GATCAGGATT CTCACCGCTC CTTTGAGTAT TGGCTCAGTG AGCATTTGCG GATGAATGGG
CTCTACTGGG GAGTGGTTAG CTTGGTGATA ATGAATGCAT TAGAGGACGC CTTGCCCCAG
AATGAAGTAA TTGACTATAT ACTTAGTTGT TGGGATGAAA AAACTGGAGG CTTTGGGGCA
TTTCCCAAGC ACGATGCCCA TATTCTTTCT ACTACTTCTG CCCTTCAAGT TTTGAAAATA
TACGACAACG AACTACAAGT TTTGGGAGAG GAAAAGAAGG AGCAAACAGC TCAATTTATA
AAGGGACTAC AATTGTCCGA TGGAAGTTTC CAAGGTGACC GGTTTGGAGA AGTAGACACC
CGTTTTATAT ACACGGCCAT GTTGTCGTTG TCGTTATTAG ACGAGTTGAC AATCGAGATT
ACAGATCCAG CCATTAAGTT TGTCATGGCG TGCCAAAACT TTGATGGTGC CTTTGGAATG
CTTCCAGGTG CAGAAAGTCA TGCAGCACAG GTATTTACGT GTATAGGGGC TTTGGCTGTA
ACAGACAATT TACATCTATT GGACGACGAC ACCAAACTAG GAAATTGGCT CAGCGAGAGA
CAAGTATTGC CAAGTGGGGG CCTTAATGGC CGTCCCGAAA AATTGCCAGA TGTCTGCTAT
AGTTGGTGGG TGCTATCTTC GCTCGCTATT TTGAAAAAGA AGCATTGGAT AGATTTGCAA
AAGTTGGAGG ATTTCATTCT TGAATGTCAA GATCTGAAGG ACGGTGGTAT TGGAGACAGA
CCTGATAATC AAACTGATAT ATACCACACT TGCTTTGGAA TAGCTGGCTT AAGTTTGATC
GACTTCGAGA AGTATAACTT TAAGGAAATA GATCCCATTT ATTGCATGCC CACAGAAGTG
ACAAAAAAGT TCAGGAAGTG GAAGAAATAG
|
|---|
| Protein sequence | MSETEEVKAF YKEKHIAFVV DQDSHRSFEY WLSEHLRMNG LYWGVVSLVI MNALEDALPQ
NEVIDYILSC WDEKTGGFGA FPKHDAHILS TTSALQVLKI YDNELQVLGE EKKEQTAQFI
KGLQLSDGSF QGDRFGEVDT RFIYTAMLSL SLLDELTIEI TDPAIKFVMA CQNFDGAFGM
LPGAESHAAQ VFTCIGALAV TDNLHLLDDD TKLGNWLSER QVLPSGGLNG RPEKLPDVCY
SWWVLSSLAI LKKKHWIDLQ KLEDFILECQ DLKDGGIGDR PDNQTDIYHT CFGIAGLSLI
DFEKYNFKEI DPIYCMPTEV TKKFRKWKK
|
|---|
| |