| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_37582 |
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| Symbol | RBV1 |
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| ID | 4850840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 198994 |
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| End bp | 200373 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640392548 |
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| Product | RUVB-like protein |
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| Protein accession | XP_001387690 |
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| Protein GI | 126273655 |
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| COG category | [K] Transcription |
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| COG ID | [COG1224] DNA helicase TIP49, TBP-interacting protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.262753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCAGA TAAACGAAAT GAATGACGTC CAGCCTTCCA GTCAAAGCAG GACCGCTGCC
CACACACACA TCAAGGGTTT GGGGTTGGAT GAACATGGAA TCGCTAAGAA AGTTGAAGGT
GGATTTGTGG GCCAGGCAGA TGCTAGAGAA GCCTGTGGGA TCATAGTAGA CTTGATCAAG
CTGAAGAAAA TGTCAGGTAA AGCCATTTTA CTTGCCGGAG GTCCTGGAAC AGGTAAGACA
GCCTTGGCAC TTGCAATTTC GCAGGAGCTC GGCCCAAAGG TACCGTTCTG TCCCATTGTT
GGTTCTGAGT TGTACTCTGC CGAGGTGAAG AAGACGGCTG CATTGATGGA AAACTTCAGA
AGAGCGATTG GGTTGAGAAT TAAAGAAATC AAGGAAGTCT ACGAAGGTGA AGTGATTGAA
TTAACGCCAG AAGAAGCCGA GAATCCACTT GGAGGCTATG GCAAAACGAT CAGTCATGTA
GTTGTAGGCT TGAAGACTGC TAAGGGGACC AAGAACTTGA GATTAGACCC CAGCATCTAC
GAAAGCATCC AGAAGGAGCG CGTAACTGTA GGAGACGTCA TTTACATCGA AGCCAACACG
GGTGCTGTTA AAAGAGTAGG AAGATCCGAT GCATATGCCA CGGAGTTTGA CTTGGAGGCT
GAAGAATATG TTCCTTTGCC TAAAGGAGAA GTACACAAGA CTAAAGAAAT CATCCAGGAT
GTCACATTAC ATGACTTAGA TGTAGCCAAT TCCAGACCTC AAGGTGGCCA GGACGTGTTG
TCAATGATGG GCCAATTGTT GAAACCTCGT AAGACAGAAA TAACAGAAAA GTTGAGAACA
GAAGTCAACA AGGTAGTCTC CAAGTATATT GACCAGGGTG TAGCTGAGTT GATTCCAGGT
GTGTTGTTCA TCGATGAAGT TAACATGTTG GACATCGAGG TCTTCACCTA CTTGAACAGA
GCCTTAGAAA GCTCTATTGC ACCTATTGTG GTTCTTGCTT CCAACAGGGG TTTAACTACC
ATAAGAGGCT CTGATGACGA CTCGACAAAG GCTCCTCATG GATGTCCTCC TGATTTGATC
GACAGGTTGT TGATTATCAG AACATTGCCA TACAACCAGG AAGAGATCAA GACCATCGTA
TCAAAGAGAG CTACTTTGGA AGGGTTGGCC GTGACCCCTG ATGCCTTGGA TAAACTTGCT
GTCCATGGAG TATCTATCTC TTTACGTTAT GCCTTGCAAT TATTAGCACC AGCTGGCGTG
TTGAGTAAGA CTGCTGGCCG TTCTGAAATC ACCGTGGATG ACATAGAAGA ATGCGAGTTG
TTGTTCTTGG ACTCGCGTCG GTCCATTAAG GTCTTGGAAG AGACTAAGGG GTTTTTGTAA
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| Protein sequence | MVQINEMNDV QPSSQSRTAA HTHIKGLGLD EHGIAKKVEG GFVGQADARE ACGIIVDLIK
LKKMSGKAIL LAGGPGTGKT ALALAISQEL GPKVPFCPIV GSELYSAEVK KTAALMENFR
RAIGLRIKEI KEVYEGEVIE LTPEEAENPL GGYGKTISHV VVGLKTAKGT KNLRLDPSIY
ESIQKERVTV GDVIYIEANT GAVKRVGRSD AYATEFDLEA EEYVPLPKGE VHKTKEIIQD
VTLHDLDVAN SRPQGGQDVL SMMGQLLKPR KTEITEKLRT EVNKVVSKYI DQGVAELIPG
VLFIDEVNML DIEVFTYLNR ALESSIAPIV VLASNRGLTT IRGSDDDSTK APHGCPPDLI
DRLLIIRTLP YNQEEIKTIV SKRATLEGLA VTPDALDKLA VHGVSISLRY ALQLLAPAGV
LSKTAGRSEI TVDDIEECEL LFLDSRRSIK VLEETKGFL
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