Gene PICST_37445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37445 
Symbol 
ID4850986 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp639623 
End bp640241 
Gene Length619 bp 
Protein Length104 aa 
Translation table 
GC content38% 
IMG OID640392694 
Productpredicted protein 
Protein accessionXP_001387353 
Protein GI126273947 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID[TIGR02180] Glutaredoxin 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.441954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCCC AAGCTACAAC CGAAAAGGTC AAGACCTTGA TCAAGACCAA GCCAGTCTTC 
ATTGCTTCCA AGGTAAGTAG AAATGTTCGA ACCTGAAGAT GTGAAATGAA AAGTCAAAAG
AATGAAAAGC AACAAGAATG AAAAGCAAAA AGAATGAAAA GAACGAAACT ACTTGTGAAT
TTGATTATCA AATGAAAACC GATAACATGT TATTGTTGAC GATACAGAGT AATTGGCTTC
AAACTTGATA GCGAACACTC TATCCAAGTA TGAGATGCTA TTTCAAGTTG ATTGTTCCCA
ATTATTGTAA TTGTTGACTA ATTTCACGAA CTTTTCGAAG ACATTCCAAT TATAAGACAT
TTACTAACGA AAGCAGAGTT ACTGTCCTTA CTGTAAGGCC ACCAAAGCTA CCATTGGTGC
TATTACCCAA GAAGCCTACG TCATTGAATT GGACGAAATT GCTGATGGCG CAGAAATCCA
AGAAGCTTTG TTCGAATTGA CTGGCCAAAA GACCGTTCCA AACGTCTTCA TTGGTGGAGA
ACACATTGGT GGTAACTCCG ATGTCCAAGT GTTGAAGTCT CAAGACAAGT TGGACGATAA
AATCAAGGCT GTCTTGTAA
 
Protein sequence
MVSQATTEKV KTLIKTKPVF IASKSYCPYC KATKATIGAI TQEAYVIELD EIADGAEIQE 
ALFELTGQKT VPNVFIGGEH IGGNSDVQVL KSQDKLDDKI KAVL