| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34605 |
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| Symbol | TCD4 |
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| ID | 4851794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2846132 |
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| End bp | 2847289 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393502 |
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| Product | Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase-like protein |
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| Protein accession | XP_001387108 |
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| Protein GI | 126275620 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTCAA CTGCAACTTA CGGAAACTTC GACACCCATT TCTTTGCTGG CCAAGACGAA
ATTGGGGAAG ACGGAATTTT GACCATCAAC AAGAGAAACA GAGAGCAATC TCATTACCCT
GAATTCTTGC CTACTTGGGA TCCCAGCCAG AAGTACCCAC CTTTGAAGTT TTTCAAGCAT
GAAGATCCTG GAAAGAGAGC CGATCCATCT TTCCCCAATC TATTTGCCAA AGATCACGAA
CAAATCGTCA AGAAAGTCAC TCCCAAGTTG GGATCCGAAG TTAGGGGAGT TCAATTGTCT
CAATTGGACT CAGCTGGTAA AGACGAGTTG GCTCTTTTTG TGGCACAAAG AGGAGTGGTA
ATCTTCCGCG ACCAGGATTT CGCAGCCAAA GGTCCAGCTT TCGCAGTTGA ATATGGTAAA
CACTTCGGAA GATTGCACAT CCACCCAACA TCTGGTGCTC CAAGAAACCA CCCAGAGTTG
CACATCACCT ACAGAAGAGC TGATCCCGGC GAATTCGAGA GAGTTTTCTC CAATAGCACT
AATGCTGTTC AGTACCATAC TGATGTATCC TACGAGTTGC AACCAGCAGG GATCACTTTT
TTCTCAGTAT TGGAAGGGCC GGAATCCGGT GGTGACACCA TCTTCGCCGA TTCAGTCGAA
GCATACAACA GATTATCTCC AGCTTTCCAG AAGAGGTTGG CCGGCTTACA TGTGTTGCAT
ACTTCCGAAG ACCAAGCTTC TAACTCTAGA GGCCAAGGTG GAATTGAAAG AAGAAAGCCA
GTTTCAAACA TCCATCCATT GGTCAGAATT CATCCAGTTA CCGGTGCAAA GAGTTTGTTT
GTCAATAGAT CATTTGCTAG AAGAATCGTT GAGTTGAAAG AAGAAGAATC CGAGTCTTTG
CTTAAATTCT TGTACGACCA CATTGAGCAA TCCCATGACT TGCAATTGAG AGCCAATTGG
GAACCAAACA CAGTGGTTAT CTGGGACAAT AGAAGGGTGC ACCACTCAGC CATCATCGAC
TGGGAAACTG CAGTTTCTAG ACATGCCTTC AGAATCACTC CACAAGCCGA AAGACCTGTG
GAAGACTTGA AGGACTTGAA TAAAGAAGAG TACGACGTTG GTGATGTTGC TGAAGCTTTG
AAAGCTGTTT TACATTAG
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| Protein sequence | MSSTATYGNF DTHFFAGQDE IGEDGILTIN KRNREQSHYP EFLPTWDPSQ KYPPLKFFKH
EDPGKRADPS FPNLFAKDHE QIVKKVTPKL GSEVRGVQLS QLDSAGKDEL ALFVAQRGVV
IFRDQDFAAK GPAFAVEYGK HFGRLHIHPT SGAPRNHPEL HITYRRADPG EFERVFSNST
NAVQYHTDVS YELQPAGITF FSVLEGPESG GDTIFADSVE AYNRLSPAFQ KRLAGLHVLH
TSEDQASNSR GQGGIERRKP VSNIHPLVRI HPVTGAKSLF VNRSFARRIV ELKEEESESL
LKFLYDHIEQ SHDLQLRANW EPNTVVIWDN RRVHHSAIID WETAVSRHAF RITPQAERPV
EDLKDLNKEE YDVGDVAEAL KAVLH
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