| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34564 |
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| Symbol | TOP3 |
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| ID | 4851720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2655678 |
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| End bp | 2657528 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 640393428 |
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| Product | DNA topoisomerase |
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| Protein accession | XP_001386841 |
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| Protein GI | 126275387 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.496706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC TATGTGTGGC CGAAAAGCCG TCCATCGCCC GCGAGGTGTC GCGAATACTC
AGTGGAGGCA GATTCACCAC GAGAAACTCC CGGAACAAGT TCATCAAAAA CTACGACTTC
ACCTACAACT TCACCAGCCT CGGTATATGC GACGTTACAA TGACTTCTGT GGTGGGGCAC
ATCACCAACA TGGACTTCCC GCCCGCGTAC CAGTGGGGAC GGTGTGTTCC CGGAAGGTTG
TTTGATGTAG AGGTGATCGA GAAGGTCACC AAACAAGACG TGTTCGACAA CATTTCCAAC
GAAGCGCGTA CCGCGTCCAG GTTGATGATC TGGACAGACT GCGATCGCGA AGGCGAGTTC
ATTGGGTTTG AGATTTATAA AGCCGCTTTC AAGGGAAACA GCGCCATCCA GGTCGGGGAC
ATCTGGCGTA GCCAGTTTTC GCATCTAGAA CGAAGCCATA TTATTGATGC TGCATCACAT
CCACGGCTGC TTGATATGAA CTCCGTCAAC GCTGTCGCGT GCCGTATGGA AATAGACTTC
CGTGTTGGCA CCAGTTTCAC GCGGTTGCTC ACTGACTGCT TGAAACAGAA CAGAATCATC
GAGAAAGGAG GGCTAGCCTC TTACGGAACC TGTCAGTTCC CCACCCTCGG CTTCGTAGTT
GATAGATACA AAAGGGTCAA ATCGTTTATC CCCGAGAAGT TTTGGTACAT TGCGGTAGAT
ATCCGTAAAC AGAACCAGAA GTCGTCGTTT GCTTGGACAA AAGGTCGTTT CTTCGACCGC
ATGTTTGTGA CACAGTTGTA CCAGGATTGT CTCCAGACAG AAGAAGGAAC CATAACCAAT
GTAGAAAGTA AACGAACCAC CAACTGGAGA CCCTTGCCGT TGACTACAGT CGAGCTCCAG
AAGGATTGTG CGCGATTCTT CAGGATGAGC GCAAAAGCAG CTCTAGATGC TGCCGAAAGA
TTGTATAACA AGGGGTTTCT TTCCTACCCA AGAACAGAAA CTGATAGTTT CCCAGCTACC
ATGGACTTTG CTGGTGTAAT TGCCAAACAG ACTGGTGATG GAAGATGGGG CGCCTATGCA
AATCTGTTGA TGGCTAACGG CCATGAAATG CCGAGAAATG GTAGCCACGA CGATAAAGCG
CATCCAGCTA TCCACCCAGT AAACTACGTA GCTATAGATT CGTTGACTTC GGCAGACGAA
AAGAAGGTAT ACGAATATGT GGTCCGTAGA TTTTTAGCCT GTTGCTCGAA AGATGCTGTA
GGTCACCAGA CAACAGCCAC TTTGCAATGG GGTAATGAAA CATTCACAGC CAGTGGGTTG
ATTGTTACTG AGAAAAACTA TTTGGAAATA TATACATACA AGAAGTGGGA AACTACAAAG
CAATTGCCGC CTCTAGAGGA GGGAGAAAAA GTCCGTATCT CCAGTGGCCA AATGAAGGAA
GGAGAAACCA GCCCTCCCAA CCACATGACA GAAACAGAAT TGATTGCATT AATGGATGCC
AATGGTATCG GAACGGACGC CACTATCGCA GAGCATATTG AGAAAATCAT GCAGCGAGAT
TACATCGTCA AACACAAACA AGGTGGAAAG GAATACATTG TTCCTACTCC GTTGGGTATG
GGGCTAATTG AAGGATTTGA CCAGATGGAG TTTGACAATA TTTCTCTCTC GAAGCCGTTT
TTACGTAAGT TGTTAGAGAA TTCTCTTCAG AAAATCGTGG ATGGCGAGCG CACCAAAGCT
GACGTCCTTG AAGAAGTTAA ACAAATCTAT CGACAGGCGT ACGGAGTCAG CTCTCAGAAG
ATGACGTTGT TGGCTCTGGT ATGTCGACAG ATAATTGCAC AGAATCTGTG A
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| Protein sequence | MKILCVAEKP SIAREVSRIL SGGRFTTRNS RNKFIKNYDF TYNFTSLGIC DVTMTSVVGH
ITNMDFPPAY QWGRCVPGRL FDVEVIEKVT KQDVFDNISN EARTASRLMI WTDCDREGEF
IGFEIYKAAF KGNSAIQVGD IWRSQFSHLE RSHIIDAASH PRLLDMNSVN AVACRMEIDF
RVGTSFTRLL TDCLKQNRII EKGGLASYGT CQFPTLGFVV DRYKRVKSFI PEKFWYIAVD
IRKQNQKSSF AWTKGRFFDR MFVTQLYQDC LQTEEGTITN VESKRTTNWR PLPLTTVELQ
KDCARFFRMS AKAALDAAER LYNKGFLSYP RTETDSFPAT MDFAGVIAKQ TGDGRWGAYA
NLLMANGHEM PRNGSHDDKA HPAIHPVNYV AIDSLTSADE KKVYEYVVRR FLACCSKDAV
GHQTTATLQW GNETFTASGL IVTEKNYLEI YTYKKWETTK QLPPLEEGEK VRISSGQMKE
GETSPPNHMT ETELIALMDA NGIGTDATIA EHIEKIMQRD YIVKHKQGGK EYIVPTPLGM
GLIEGFDQME FDNISLSKPF LRKLLENSLQ KIVDGERTKA DVLEEVKQIY RQAYGVSSQK
MTLLALVCRQ IIAQNL
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