| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34276 |
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| Symbol | |
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| ID | 4851241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1293726 |
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| End bp | 1294400 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640392949 |
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| Product | predicted protein |
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| Protein accession | XP_001387890 |
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| Protein GI | 126274227 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.021374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAAAC GAATTGTAAG AACCAGCACT CCATTATTGG CACTAGCAGT TGGTGTTGCT
GCTTTTCCTG TCGGCTGGAG AAAAGGTAAT CTCAGAGACA AGAAGATTTT ACATATTAAT
GAGGCAGTAG TAGAGCAAAT AGAACAGACA GAAGACTACA AGAATTTGGT TGCTGATCCG
AAAAACGTCC AGTATAATTC AAGTCATGCT TTTCCCGATC AACATCACAA GAATTACGTA
GGGACAGGAC TCCTTTTTGG GCCCAACTTG TTCGAGATCG ATCCGATTGT GTTCTTAAAT
GAGGAAGCAG GCGAAATCAC CAGTTTCTAC CATCTAGGAG ATAAGTTGGT CAGTCAGGAC
GGACAGATCC ACAATGGTGT AGTGTCCACT ATTCTTGATG AAGGACTATG TTCGGCTGGA
TTTCCGTTGT TGCCTTCCAA GAAGGGAGTA ACGGCATCGT TATCTATTGA TTTCAAGAAC
CAGGCTCCTC CAGGCAGCAC AGTTGTATTG CGGGCCAAAG TCGTAGAACA CAAACGTAGA
AAAGTAGTCA TTGAGGGAAG CTTGGAGACT TTGCCTTTTA AGAAGGGCGA GAAGCCGCTC
AAGATTGCTG AGTCCAGGTG TGTTTTAGTG GAGCCTAAGT GGTTCAAGTA TTTCTCGTGG
TTTCAGATAA TATAG
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| Protein sequence | MFKRIVRTST PLLALAVGVA AFPVGWRKGN LRDKKILHIN EAVVEQIEQT EDYKNLVADP
KNVQYNSSHA FPDQHHKNYV GTGLLFGPNL FEIDPIVFLN EEAGEITSFY HLGDKLVSQD
GQIHNGVVST ILDEGLCSAG FPLLPSKKGV TASLSIDFKN QAPPGSTVVL RAKVVEHKRR
KVVIEGSLET LPFKKGEKPL KIAESRCVLV EPKWFKYFSW FQII
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