| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29216 |
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| Symbol | |
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| ID | 4851946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3269399 |
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| End bp | 3271558 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | |
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| GC content | 39% |
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| IMG OID | 640393654 |
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| Product | Leucine rich repeat protein |
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| Protein accession | XP_001386947 |
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| Protein GI | 126276106 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.55505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCTT TTGTGCTTCA CTTGGATCGT TTCCCTCTAC ACATAGTGGA GTCTATAATC
TGTCATCTTC CCTTTCGTCT TGCTCTTGCT GTCGTTTCTA ACGGCTCCTC TCCGTATCAA
CACCCATTGC TCAATGCGGT TTACAGGAAT ATCGAAGTCA ACACAGAGGA AGGCTATGAC
GATGATCCTC TATGTATGAG TCTAGAAAGA CTCAGAAAGA GGTACCTTCT CGACAGCGCA
GTAGCCTCTG TACATATGTC TGTATATATC CCAGTGGGGA ACTTTGAAGT AGTTGCTGAG
TTCATTGATA GAAACACCCA TATCCATGTC CAAAATCTTC GAGTTATTGA TGAACCATCA
AAGGAATTGT TTACCCGAAT GCTGACAATA GTCCAGCGAG TCAAAAAGCT CCTGTTCGAA
ACCCCTGAAG AATTCGACGA GGCCTCAGAG CAGGCCATGT TGGAATACAC GCTCCCAGCA
AACTTATACG GACTTCATAC TTTCGATTTC CATACTGAAA TGTACATGCC TCTCCATTTG
CTGAAACTAG AACTTCAGAT CTTCAGTTTC AAAGAAGATA TCATTCAAAG TCTCCCTCCA
AGCCTTGAAT CACTTAGCAT AATTTTACAC CAAGCCGAAC CGTTCCTATT ACCGGATGAA
ATGGCTCTAC TTCCGAAAAC AATCAAATCA TTACAGCTCG AGCAATGTTT GGTTCTACAA
GGAAAAGGTG AAATCACGAT TGATTTCCCC AACACTTTAC AACTGTTCAC ATTCGTTGCC
TATGAGAACT TTGAAAATCT CGTTCTCGAC TTGTCAAATT TGATCAATTT AACAGATATT
GATATAAATG GTCTACAATA TAATCTTCCA TTATCAGCAT TCAAATTACC TGCCCTGATA
GAAAATTTGC AGTTTAAATC GGGACTTCTA TCCGAAGGCA TGTACCAGAT TGAAGAGCTT
TCAAAATTGA AACAACTTCT GTTATTTAGA AGACCTAAAC CCCAAAATAA CGAATATGAG
AATGAATTGA ATTCATCCTT ATTTAAAAGA GTTGTTCTAC CTTCCGGCCT TCAACAATTC
ATCATACAAG ATGGGTTTGG AATCCTGTCG CAAGGATGCA ATCCTCTTTT GCTTCGAAAC
TTTGACCTCC CAAAGGATTT GGCAAGATTG TCATTGGCCA ACTGCACTTT GCATGCGATC
CTTGAACATA TGTCAAAATT GACGGACTTA AGTCTTACGA GTGTAGGCAC TTTTGATCAA
CTATCGACAT TACAGACTTT AACTAAATTG CGTATAACGA ACCTGAAGAT ACCATTATAC
TTTTGGGAAG ATGTTTTACA TATGGCAAGT TTGAGAAATT TGGAAGTTAG CTTTTGTGAA
CTTAAGGGTT TCCCTTTAAA GCTACCTGAA AGACTCGAGA GGTTGAACTT AGGGGAAAAT
AACATAACGG AAGTTAATGT TCAATTGCCG TACAAATTGT TTGACCTCAA ACTATGTCGT
AACTTTATCA CAAGCTTTAT TATCATTGGC GAGAGCAAGT TGAGGAACTT GGACCTCGAC
ATTAATAAGT TGACCGAGAT CAATAATACC ACTTTCCAGA TTCCAGGAAG TGTTAAGGAA
CTATCCCTTC GAACCAACCC CATCACTACC GTGCACAAAG ATTTTACGTT TCCCAGAGAA
ATTCGATTTC TTTACCTCAA CCGAACTAGC ATAGTTAAAG TAGAGGAGGT ATTGGCAAAA
TTACCCCCAC AAATAGTGGA ATTGGAGATG GACAGTAAAA GAAGGGTTCA AGATGGCGAC
AAACCAAAAT CCATTCGAGT TAGTTCTCCT ACCCTTTGGA AGGCCAGCAT CATGAATTGC
TTGGTAGACT GTGAAATAAT CTGGGAAGAC TGTTCCAATC TTGAATATAT TGATATGAGT
TATAATACCA TTGAAGTGAT ACGTGTTGAA ACGTTTCCTC TCTCGTTGAA GAGTTTGCGC
TTGAAGCAGT GTGGTTTGCG AGAAGTAGAA GGAGACTTTT ATAAGTTGCC GAACTTGTTG
TTAGCTGATC TACGAAACAA CAATTCACTT TCATGGTCGA ACGAACAAAG AGAGCTTAAT
AAGAATGTTC GTCTAGTACA AGAATCTGAT TTCGAGGATG ATACTGAATC TGAATCCTAA
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| Protein sequence | MESFVLHLDR FPLHIVESII CHLPFRLALA VVSNGSSPYQ HPLLNAVYRN IEVNTEEGYD
DDPLCMSLER LRKRYLLDSA VASVHMSVYI PVGNFEVVAE FIDRNTHIHV QNLRVIDEPS
KELFTRMLTI VQRVKKLLFE TPEEFDEASE QAMLEYTLPA NLYGLHTFDF HTEMYMPLHL
LKLELQIFSF KEDIIQSLPP SLESLSIILH QAEPFLLPDE MALLPKTIKS LQLEQCLVLQ
GKGEITIDFP NTLQLFTFVA YENFENLVLD LSNLINLTDI DINGLQYNLP LSAFKLPALI
ENLQFKSGLL SEGMYQIEEL SKLKQLLLFR RPKPQNNEYE NELNSSLFKR VVLPSGLQQF
IIQDGFGILS QGCNPLLLRN FDLPKDLARL SLANCTLHAI LEHMSKLTDL SLTSVGTFDQ
LSTLQTLTKL RITNLKIPLY FWEDVLHMAS LRNLEVSFCE LKGFPLKLPE RLERLNLGEN
NITEVNVQLP YKLFDLKLCR NFITSFIIIG ESKLRNLDLD INKLTEINNT TFQIPGSVKE
LSLRTNPITT VHKDFTFPRE IRFLYLNRTS IVKVEEVLAK LPPQIVELEM DSKRRVQDGD
KPKSIRVSSP TLWKASIMNC LVDCEIIWED CSNLEYIDMS YNTIEVIRVE TFPLSLKSLR
LKQCGLREVE GDFYKLPNLL LADLRNNNSL SWSNEQRELN KNVRLVQESD FEDDTESES
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