| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29209 |
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| Symbol | RTA1.2 |
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| ID | 4851938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3241803 |
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| End bp | 3242720 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393646 |
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| Product | putative transporter or flippase transmembrane protein |
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| Protein accession | XP_001387190 |
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| Protein GI | 126276077 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.112208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.192439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGAGT GGAAAGCTTT CAATTACATT CCCATGCTTT CAGTGAATAT TCAATTCGCA
GCAGTGTTTG CAGTCTTCTT GGCCGTTCAA GTCCTTTACA GCTGGCATCT CCATACAAAG
TACTCTTCCA GCTTGGGGAA GACTAAACTC AAAAGGTTCC ATCTCATGAT GATTCCATTT
TCAATTGGAA TGGCTCTCGA AGTTGTAGGC TTCGCTGGAA GAATCATTAA CCATTACGAT
TTGCAATCTT TAGCAGGATT TATTATTCAA GCTGTTTGCA TACTTCTTGG ACCTACGTTC
ATGGCAGCAA CGATTTACAT GCTGTTTGGA GAAATCGTGA AGACCTTAGA TGCGAGCCAT
CATTCAGTTG TTCCAATTGC GAAACTCACC AAGATATTCG TTGGTGGAGA TTTATTATCG
TTGACATTAC AGAGCACAGG TGGCTCCCTC ACCACTAATG ACCTGAAGAT GCTCTACAAT
ATAGGCGAAA AGATAATTCT AGGAGGCTTG TTTGTTCAAT TGATCTTTTT TGGCGTTTTT
GTTCTCTGTG TTTTGCTGTT CTATGTTAAA TGCTCCAATT CCCCAACCAA GAGTGCTGCC
ATGAATTCTG CTCGTTCGAG CATTATTCAA AATTGGAAAA TCCACGTCAT TCTGTTGGTC
GTAGCCTCGC TACTCATTCT TGGAAGATCT GTCTATAGGG TTATTGAGTT CTTGCAAGGT
GCCAATGGAA TCCTTATTTC AGATGAGAAG TATCTCTTCT TACTAGACAG CCATCTCGTT
GCTCTGGCAG CACTTCACAT GATTGTATTT TACACCCCCA GTATGTTATG TTACACAGAA
AAGGAAAACA TGAAATCAAG CACTATTCGG ACAGATCAGA AGTTTTCCGT TCCTGAAACA
GAGCCTGTAT CTGTATAA
|
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| Protein sequence | MDEWKAFNYI PMLSVNIQFA AVFAVFLAVQ VLYSWHLHTK YSSSLGKTKL KRFHLMMIPF
SIGMALEVVG FAGRIINHYD LQSLAGFIIQ AVCILLGPTF MAATIYMLFG EIVKTLDASH
HSVVPIAKLT KIFVGGDLLS LTLQSTGGSL TTNDLKMLYN IGEKIILGGL FVQLIFFGVF
VLCVLLFYVK CSNSPTKSAA MNSARSSIIQ NWKIHVILLV VASLLILGRS VYRVIEFLQG
ANGILISDEK YLFLLDSHLV ALAALHMIVF YTPSMLCYTE KENMKSSTIR TDQKFSVPET
EPVSV
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