Gene PICST_29079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29079 
SymbolADH4 
ID4851815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2905865 
End bp2906989 
Gene Length1125 bp 
Protein Length374 aa 
Translation table 
GC content47% 
IMG OID640393523 
ProductAlcohol dehydrogenase, class V 
Protein accessionXP_001387122 
Protein GI126275685 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCT CAAAAACTGT TCCTGAAAAA TTCTCCGGTT TCGGTGTCGA TAAGACTGAA 
AACTGGAACA AGGCCAGATT CGTCCAGTAC GACCCTAAAC CACTTTTGCC ATACGACATA
ACCATCAAGG TCGTTGCCTG CGGTGTGTGT GGAAGTGACT GTCACACCGT TTCTGGTAAT
TGGGGCCCTT TGAACAGAAC CGATTTGGTC GTGGGCCACG AAATCGTCGG TGAAGTCATT
GAGGTCGGCC CCGAAGTCAC CAAACACAAG CTTGGAGACA TCGTTGCCAT TGGTGCCCAA
TCTGACTCGT GTGGTGAATG TGACCGTTGT AAGAACAACA ACGAGCAATA CTGTCAGAAG
GGTAACGTTG GTACCTACAA CACTCCTAAC AAGAAGTGTG GTGGTTACGT TACCCAAGGT
GGATATGCCT CTCATTTCAG AGTCAACTCC CATTTTGCTG CTCGTGTTCC TGCTAACTTG
GATGTTCATT ATGCTGCTCC TTTACTCTGT GGTGGATTGA CTGTCTACTC GCCAATTGTT
CGTCATGCAG GCTACGACTT GAAGGAAAAG GTCATTGGTA TTGTTGGTAT TGGAGGTTTG
GGATCCATGG CTATTCAAAT TGCCAAGGCT TTGGGTGCTA AGGAAGTTGT CGCTTTCTCG
AGAACATCCA GCAAGAAGGA AGATGCCATC CAGTTGGGTG CATCCAAGTA CATAGCCACC
AAGGAAGACC CAAACTGGGC CGAGTCGAAC TTGGACACTT TCGACATGAT TCTTAACTGT
GCCAGTTTCG GTAAGGGTGT CAACTACAAC TCGTTCCTCA GATCGTTGAA GTTGGGTGGT
AAGTATGTCA CTGTTTCTGC TCCTCCTGTG GATGAACCCA TCACCATTGC TCCTTTCAAC
TTGCTCATGG GAGGTGCTAT CATTGCTGGA TCTGGTATTG GTTCAATGAA GGAAGCTGAC
GAATTGTTGA AGTTGTACGC CGACAACAAT TTGGCTCCAT GGATCGAAAA GGTGCCTATC
AGTGAAGAAG GTGTCCACAA GGTGATGGAC AAGATCAGTG TCAGTGACGT CAGATACAGA
TTTGTGTTGA CTGACTTCGA CAAGGCTTTT GATTCCAAGT TGTAA
 
Protein sequence
MSTSKTVPEK FSGFGVDKTE NWNKARFVQY DPKPLLPYDI TIKVVACGVC GSDCHTVSGN 
WGPLNRTDLV VGHEIVGEVI EVGPEVTKHK LGDIVAIGAQ SDSCGECDRC KNNNEQYCQK
GNVGTYNTPN KKCGGYVTQG GYASHFRVNS HFAARVPANL DVHYAAPLLC GGLTVYSPIV
RHAGYDLKEK VIGIVGIGGL GSMAIQIAKA LGAKEVVAFS RTSSKKEDAI QLGASKYIAT
KEDPNWAESN LDTFDMILNC ASFGKGVNYN SFLRSLKLGG KYVTVSAPPV DEPITIAPFN
LLMGGAIIAG SGIGSMKEAD ELLKLYADNN LAPWIEKVPI SEEGVHKVMD KISVSDVRYR
FVLTDFDKAF DSKL