| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29003 |
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| Symbol | |
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| ID | 4851740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2709410 |
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| End bp | 2711905 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | |
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| GC content | 36% |
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| IMG OID | 640393448 |
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| Product | predicted protein |
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| Protein accession | XP_001387086 |
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| Protein GI | 126275441 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5141] PHD zinc finger-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.596418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.417698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACC AAACTTCATT CACAACAGGC AGATCGATTG CTGATCCCAA CTACGCCCAG
GTGGCGCTCT TTGACAGTCA CTCCAAGCCA CGTGAGGAAA GGGACTTCAA AGAAATATAC
CCCGATCTTG ACGAAGGCAT CCAGCTCAAC ATGTTTGTAT TGAATAATGA CGCGGAGGAT
GACAATGACA TCGACATGGT TAATCCTGGT CCTGTAATTA TGTCCGAATT AAAGCAACCC
GTGTTCAATA AGATAGATGA TGGAGCGGGT GACGCAAATC GTTTAAATGT CAAATTTAGT
AAGTCTATAA CAGCGTATGG CTTCCAGGAA CAAAATAGAG TAATTAGTAA AACTATCCAA
GACACATATA TTCGTCCGTT CCAGTTGCCT GGTTCAAACG AAAATGGTTC CGATGATGTT
TCCATAATTG GAAGAATTTT GGAAAGAAAA CGAAACGCCG TAGAATATGA TATGGACGAA
CAGGATTGTT TGTTCTTGAG TTATAGAAAC CAACAACCCA ACAATGTAAT CAAAATAACT
CCAGAAGTGT TTGAAATTAT GATAACGACA TTAGAAAATG AATGGGACAA ACTAGAACAC
CAAATGAATT CGATAATAAA TAATAATGGC AGTCTGGAAA GAGCCTATGA TGGCTCTACG
ACGTTTCTTC TGTTGGACCG AGATGATATT GAGAAATACG GAACCGACGA CGGCATAATT
CCAGGTTCTA TATATGATCA AAGGTGTGCC GTATGCAATG ATAGTGATTG TGACAATTCG
AATGCTATTG TTTTTTGTGA TGGTTGCGAT ATAGCTGTAC ACCAAGAGTG TTATGGAATA
GCATTTATTC CTGAAGGGCA ATGGCTTTGC CGAAAATGTA TGATAAACAA GAACCGTAAA
ACGGATTGCG TTTTTTGTCC GAGTAAAACG GGTGCATTTA AGCAACTTGA TAATAGTTTG
TGGAGCCATG TCATTTGTGC TTTATGGATT AATGAATTAT ATTTCGCCAA TCCGATTTAC
ATGGAACCTA TTGAAGGCAT AGATTTAATT CCGAAAAGCC GTTGGAAATT GGTTTGCTAT
ATTTGTAAAC AGAGGATTGG TGCTTGCATC CAATGTACTA ACCGAAACTG CTTCCAGGCA
TATCATGTCA CATGTGCTAG AAGAGCTGGT CTCTACATGG AAATGACTAT GGGAATGCAA
GGTGCTATTA GCAACAAGAT GACATTGAGG ACTTTTTGTG ACAAGCACAG TCCGCCAAGT
TGGAATGCAG AAGATATTCC CAGGGGCATT CAACGGACTA GGTTGTTCTA TCGTGATACG
AATATTCTAA ATGAAAGAAA TGCCAAACTC AGTAGCTATC AAAAGACTGC CAACAAACTT
AATATATTCA AATGGAAAAC AGAAAATAAT ACTCCAATTG CCCCCAAGGT TTTTAGTGAT
GTTTTGTTTA ATATTTTGCA AGCATTAAAA GTTGAAAATC AAGTTTCCTT AGAAGAAAAT
AATCAATTGA AAGACTTGAA TGTCTTGCCT AATCGATCTC GTGAAGATAT TTGGGCGGAC
ATGAGAAGTA TCAGCAATGA AATTTGCCGC TATTGGTGTT TAAAAAGAGA ACTGAAAAAG
GGAGCTCCAT TAATAAGAAA GAATAACAAT TTCGTTTCCA CGAGCTCCAT TTTATATAAC
GCTAATGGAT CTGATACTAG AAGTGACGGA GATTATTATG AACAAATTGA CGAAATTAAA
GGACGGATAG ATTTTGCAGA AGTTTTGGTC AGAGATTTAG ATAAGGTGAT TGATATGAAT
AAGGATTCAT TATCGAGACA AGTCTATTCA CGAGAAGTGC ATAACTTAGA ATTTGAATCA
ATTGATGCTG TTTATTTTCC TATCAAGAAA GTCATCGAAA ATTGTTTGAA TACTTTAAAT
GAAAAATTCG ATGCTAATAG AATTATTCAA GGATATCAAG TCAAGGTGGA AAATGAAAAT
GAAAATAGAA GGAAATTTGG TGATTTACCT GTGCAAATAT CTGAACAAGA TAATAAAAAT
GGTGAGGGGG TGCTGGATTT TCTACAGCGG GATTTTACTG ACATGTTACC GCGACCACTT
ACATTGTCTC AAATAATTTC AAAAAACGCA AAGTACGGTT ATTTCACAAT AGAGGAGTTC
AATAAAGATC TTCAGAAATT TAGTGAAATT GTTCTTCAAC GAAGTAAATC ATCAAACAAT
ATTCACAGGC TAATGAAGAG ATGGATGAAA GAGTATTACA AGATACTTCC AGAGATGTTT
TCCTTTGAAA ACAAGGTTAA AAGGGAATTA AATAATAACG AGAAAATATT GACAAGTAAT
TATTTTAGTT CCCCTTCCCT TGGCGTGCAT GGGAGTGAGA TTATGTTTAA ATCATATGAT
GTCAAAGAAT TATTGGACGA GAATGACTTG AGTGAAGTGG AAAATGATAT GAACGATGCA
AATCAACATG AGCTACATAG ATTTTTAAAT GGTTGA
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| Protein sequence | MSNQTSFTTG RSIADPNYAQ VALFDSHSKP REERDFKEIY PDLDEGIQLN MFVLNNDAED
DNDIDMVNPG PVIMSELKQP VFNKIDDGAG DANRLNVKFS KSITAYGFQE QNRVISKTIQ
DTYIRPFQLP GSNENGSDDV SIIGRILERK RNAVEYDMDE QDCLFLSYRN QQPNNVIKIT
PEVFEIMITT LENEWDKLEH QMNSIINNNG SLERAYDGST TFLLLDRDDI EKYGTDDGII
PGSIYDQRCA VCNDSDCDNS NAIVFCDGCD IAVHQECYGI AFIPEGQWLC RKCMINKNRK
TDCVFCPSKT GAFKQLDNSL WSHVICALWI NELYFANPIY MEPIEGIDLI PKSRWKLVCY
ICKQRIGACI QCTNRNCFQA YHVTCARRAG LYMEMTMGMQ GAISNKMTLR TFCDKHSPPS
WNAEDIPRGI QRTRLFYRDT NILNERNAKL SSYQKTANKL NIFKWKTENN TPIAPKVFSD
VLFNILQALK VENQVSLEEN NQLKDLNVLP NRSREDIWAD MRSISNEICR YWCLKRELKK
GAPLIRKNNN FVSTSSILYN ANGSDTRSDG DYYEQIDEIK GRIDFAEVLV RDLDKVIDMN
KDSLSRQVYS REVHNLEFES IDAVYFPIKK VIENCLNTLN EKFDANRIIQ GYQVKVENEN
ENRRKFGDLP VQISEQDNKN GEGVLDFLQR DFTDMLPRPL TLSQIISKNA KYGYFTIEEF
NKDLQKFSEI VLQRSKSSNN IHRLMKRWMK EYYKILPEMF SFENKVKREL NNNEKILTSN
YFSSPSLGVH GSEIMFKSYD VKELLDENDL SEVENDMNDA NQHELHRFLN G
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