| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28993 |
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| Symbol | PMP47 |
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| ID | 4851731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2681628 |
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| End bp | 2682632 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393439 |
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| Product | Peroxisomal membrane protein PMP47 |
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| Protein accession | XP_001387080 |
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| Protein GI | 126275418 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.629442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGAAA CCGCCGAAAT CGCCCATGCC ATCGCTGGTG CCGGTGGTGG AGCGTTGGCC
ATGATTGTCA CGTATCCTTT GGTGACATTA TCGACATTGG CTCAAACAGC ACAAAAGAAG
AAGAGTCAGG AACCAAGTAA GGCTCCGAAG TCATCTATAA GTTTGACCAC GAGAGAACAA
ATCGTCTCTG CCATATCCAA GAGTCCTACT TTTGTAGCTG CCCAGGAAAT CATTAAGGAA
AAAGGGCCCT TGGGCTTGTA CGCTGGTTTG GAGAGTGCCT TATACGGTAT AACCTTGACC
AACTTTATCT ATTACTATTT TTATGAACTC ACGACCAACT TCTTTTTGAC TCCTAGAGCC
AAGAAACTGG GCAAAGGATT GACAGCTATC CAGTCAATTA TTGCTGGTGC TGTTGCTGGT
GCCATAACTT GTGTTGGATC CAATCCGTTC TGGGTGGCTA ACACCAGAAT GATGACTGAA
AAGAACTCAG GAAAGACTAA AAACTCTTCT GCCTTTGCAA CAATCTTGGA CATTATCGAA
AAGGACGGCG TAGGAACCTT GTTCGCCGGT GTACTTCCAG CATTGGTCTT GGTCATCAAC
CCAATTATTC AATATACCAT ATTTGAACAA ATCAAGAATG TCATTGTTGC TAAGAATGGT
GCCAAGTCTT TCACTGCTGG AAAGGCTTTC TTTATTGGAG CTTTTGGTAA GTTGATTGCA
ACTTTCTTGA CCTACCCATA CATCACCTTG AAGGCAAGAA TGCACATCAA AAAGAGGGCC
AAGGACGGTG AAGAAAAGGA AGAATTATCG ATGTATGAGG AAATCAAGAA AATCATCAGA
GAAGAAGGAT TGGAAGGTTT GTATGCTGGT TTGTCCGTCA AATTATTCCA ATCGATCAGT
ACTGCTGCAT TCCTTTTCTA CTTCAAGGAA GAATTATTGT CAGGAAGTGT CCAATTAGTG
AACATAATTA CAATGTTCAA GGTCAAAAAG CAGATCAAGC AGTAA
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| Protein sequence | MSETAEIAHA IAGAGGGALA MIVTYPLVTL STLAQTAQKK KSQEPSKAPK SSISLTTREQ
IVSAISKSPT FVAAQEIIKE KGPLGLYAGL ESALYGITLT NFIYYYFYEL TTNFFLTPRA
KKLGKGLTAI QSIIAGAVAG AITCVGSNPF WVANTRMMTE KNSGKTKNSS AFATILDIIE
KDGVGTLFAG VLPALVLVIN PIIQYTIFEQ IKNVIVAKNG AKSFTAGKAF FIGAFGKLIA
TFLTYPYITL KARMHIKKRA KDGEEKEELS MYEEIKKIIR EEGLEGLYAG LSVKLFQSIS
TAAFLFYFKE ELLSGSVQLV NIITMFKVKK QIKQ
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