| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28893 |
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| Symbol | |
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| ID | 4851633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2389968 |
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| End bp | 2391206 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640393341 |
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| Product | predicted protein |
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| Protein accession | XP_001387032 |
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| Protein GI | 126275106 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.284292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCCAT CTGTTCAAGT CCAGCAAGTG GACACCTCCG CAGACTCTAT CACTGAGAGT
GTTAAGAAGA TCGCTTTAGG CGTTGGAAGG ACTGGTGATG GAACTTCCAA CTTCAAGGGA
GGATTTGCCG ATTCCTCCGT AGACAAGCTT CCAGAGCCTA CCAGAAAAAG ATTCGAAAAG
TACGGAATCG ACATTTCTCG TGGTTACCCT GAAAGACCTC CTACTGAGGA GATTCCGGTT
TTCATTGACG ACGCTACTGC CATCAGAAAC ACACCTTGGG AGTTTATTGA CAGAGGTTCC
AAGGCCGATC CGGAGAAGAA GGCATTGTTG GGGGCTGCTA AGGAAGTTAA ACATTTGACA
AAGCACATTG GTACTGAGAT TGTAGGTTTG CAATTGAGCG AACTCACGGA CCAACAGAGA
GATGAATTGG CCCTCTTGAT TGCCGAGAGA GTCGTAGTCT TCTTCAGAGA TCAGGATTTG
TCTCCACAGA AACAGTTCGA ATTGGGCGAA TACTTCGGCA AAGTTGAAGT TCATCCTCAA
CAGGTTCACG TTCCTGGCAT TCGTGGTATT ACGGTCATCT GGCCTGAGCT TTTTAAGAAA
TTTGGTCCTA TCACCTTCAG AAAGACTTTG AACCATTTCA CCTCGAGGTG GCACACTGAC
TTGGTTCACG AATTGCAACC TCCAGGGATC ACTCATTTGC ACAATGATAC CATTCCTGAA
GTTGGGGGAG ACACCGTTTG GGCTTCTGGT TATGCCGCTT ACGACAAGCT TTCTCCAGCT
TTGCAAGAAT TCCTTGATGG GAAGAAGGCT GTATACTTCT CTGCTAACAA GTACGTTGAT
CGTGAGAACC CATTGAAGGG TACTGTTCAC ATTGAAAGGG AACACCCAAT CATCAGAACC
CATCCTGTTA CCGGCTGGAA GTCCTTGTAT GTCAACCGTG CTATGACCAG CAGAATTGTA
GGTTTAGAGC CAGGTGAATC AAAGGTCATC TTAGAGTATT TGTTTGATGT CTTTGAAAAG
AACTTGGACA TCCAGGTCAG GTTCAACTGG AAGCCATCCC AGCCAGGCTT GGGTACTTCT
GCTCTTTGGG ATAACAGAAT CAGTCAGCAT TTTGCTGTTC TTGATTACGA GGGCCAAGAA
CCAAGACACG GTACGAGAGT AAGTTCATTG GCTGAGGTTC CTTTCTACGA TGCCGAATCC
AAGTCTCAGA GAGAAGCTTT GGGATTGTCC TTAGATTAG
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| Protein sequence | MAPSVQVQQV DTSADSITES VKKIALGVGR TGDGTSNFKG GFADSSVDKL PEPTRKRFEK
YGIDISRGYP ERPPTEEIPV FIDDATAIRN TPWEFIDRGS KADPEKKALL GAAKEVKHLT
KHIGTEIVGL QLSELTDQQR DELALLIAER VVVFFRDQDL SPQKQFELGE YFGKVEVHPQ
QVHVPGIRGI TVIWPELFKK FGPITFRKTL NHFTSRWHTD LVHELQPPGI THLHNDTIPE
VGGDTVWASG YAAYDKLSPA LQEFLDGKKA VYFSANKYVD RENPLKGTVH IEREHPIIRT
HPVTGWKSLY VNRAMTSRIV GLEPGESKVI LEYLFDVFEK NLDIQVRFNW KPSQPGLGTS
ALWDNRISQH FAVLDYEGQE PRHGTRVSSL AEVPFYDAES KSQREALGLS LD
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