| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28701 |
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| Symbol | LYS21 |
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| ID | 4851460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1865914 |
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| End bp | 1867269 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640393168 |
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| Product | homocitrate synthase |
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| Protein accession | XP_001387991 |
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| Protein GI | 126274588 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02146] homocitrate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.453642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAATGG ACTCGGTAAT CGACGGGTTT CTCAAGTTTG ATCTGGAATA TACGGAAATA
ACGTACAATA ATCCGTATGG TCCCAATCCT GCTGATTATC TTTCAAATGT ATCACATTTC
CAGGTTATTG AGTCAACATT ACGAGAAGGG GAGCAATTTG CAAATGCTTT TTTTCTGACG
GACACAAAGA TAGCCATTGC AAAGGCGCTC GACGACTTTG GTGTCGATTA TATTGAGTTG
ACATCTCCTG TAGCCTCTGA GCAGTCTAGG AGAGACTGTG AGGCCATATG CAAGTTGGGT
TTGAAAGCGA AAATATTGAC CCATATACGG TGTCATATGG ATGATGCACG AGTAGCAGTT
GAGACGGGTG TGGATGGTGT TGATGTTGTT ATAGGAACAT CTCAGTTTTT GCGAGAGTAT
TCGCACGGGA AGGATATGAC ACACATCACC CAGAGTGCCC TAGAGGTGAT CGAGTATGTG
AAGTCTCATG GAATAGAGAT TCGTTTTTCT TCAGAGGATT CGTTTCGGTC GGAGTTGACT
GACTTGCTTA GCATTTACCG GGCTGTAGAC AAAGTCGGTG TAAATCGTGT AGGTATAGCA
GATACTGTTG GATGTGCCAA TCCCCGGCAA GTTTATGAGT TGGTAAGAAC TTTAAAGGGT
GTAGTGAGTT GTGATATCGA GTGTCATTTC CACAATGATA CTGGTTGTGC TATTGCCAAT
GCGTACACTG CTTTGGAAGG TGGAGCCAAG TTGATCGATG TGTCGGTATT GGGCATTGGC
GAGAGAAACG GCATTACTCC TTTGGGAGGA CTAATGGCTC GGATGATCGC AGCTGATCGT
GACTACGTCC TCTCCAAATA CAAGTTGCAC AAGCTACGAG ACATTGAAAC GCTTGTGGCC
GAGTCTGTGA GAGTCAACAT CCCGTTCAAC AACCCTGTGA CTGGCTTTTG TGCTTTTACT
CACAAGGCTG GAGTTCATGC CAAGTCGATT TTGGCTCCTC CTTCGGAGTA CGAGATATTG
AGTCCCTCGG ACTTTGGTTT GACCAGGTAC ATCCACTTTG CCAACCGGTT GACGGGTTGG
AATGCCATCA AGTCACGAGT GGACCAATTG AATTTAGATC TCAGTGACGA ACAGTGCCAA
GAAGTAACGA TGAAAATCAA GAAACTCGGC GATGTACGTC CCTTGAACAT CGACGATGTG
GATTCCATCA TCAAAGATTT CCATGCCAAT GTGACCACAC CTGTTGTACG TCCCGTGGGA
ATCAACAGTG ATACAGCTCC GCGAGTACCA CATAATCTCG AGAGATTGGA TGGGAATGGC
GTAGTAGCCC GGAAACTATT GGGACGTCGT CGTTGA
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| Protein sequence | MEMDSVIDGF LKFDLEYTEI TYNNPYGPNP ADYLSNVSHF QVIESTLREG EQFANAFFLT
DTKIAIAKAL DDFGVDYIEL TSPVASEQSR RDCEAICKLG LKAKILTHIR CHMDDARVAV
ETGVDGVDVV IGTSQFLREY SHGKDMTHIT QSALEVIEYV KSHGIEIRFS SEDSFRSELT
DLLSIYRAVD KVGVNRVGIA DTVGCANPRQ VYELVRTLKG VVSCDIECHF HNDTGCAIAN
AYTALEGGAK LIDVSVLGIG ERNGITPLGG LMARMIAADR DYVLSKYKLH KLRDIETLVA
ESVRVNIPFN NPVTGFCAFT HKAGVHAKSI LAPPSEYEIL SPSDFGLTRY IHFANRLTGW
NAIKSRVDQL NLDLSDEQCQ EVTMKIKKLG DVRPLNIDDV DSIIKDFHAN VTTPVVRPVG
INSDTAPRVP HNLERLDGNG VVARKLLGRR R
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