| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28659 |
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| Symbol | |
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| ID | 4851419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1769322 |
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| End bp | 1771124 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393127 |
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| Product | predicted protein |
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| Protein accession | XP_001387571 |
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| Protein GI | 126274547 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.262753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAAA AAACACTTCC GATCTACCAA TCTTCAGCCA AGAAGAACCA CAGGTCGTCC
TGGAGTAGAG TATTACTCTC AATTGCAGCT TTCTCAGCTG TGGTCGGCTG GTGGGCATAT
TCTTCTTCCA TCACTCATAC TTCGCCTTTG GCATCTTTCC TGAAAATTGA TCTTTCGTCT
GTCTTCGGAA CCTTTTCCGA ACCTTTGACA TCTTCTGGAT TATGTCCGAC AGTTGAAAAG
TTGGATCCTC TGGAGTTTTT GTATAACAAT GAGACACTTG ACAGAATTCT CCACGACGAA
GCTTTCAAAG CGAAGTCTCG GGAGCGTCTT CTTGGAGCTA TTCGTGTTCC AACTGAGCTG
TACGATGACT TGTTGAATCC GAATTCTGCA GACACTTTGG AAGACCTATT AGAGATAGAA
CCAAGGTGGA AGCCTTTCAT TCCCTTCCAC AAGTACTTGG AAGATACCTT TCCTTTGGTT
CACAAGAATT TGAAGGTTGA GAAAGTCAAC AAGTTTGCTT TGGTTTACAC TTGGGAAGGT
TCTTCTAACA AGAAACCAAT TCTTTTGGCT GCTCATCAGG ATGTCGTTCC TATCCAGAAG
GAATCGCTTG ACCAATGGGA TTATCCTCCG TACGAAGGTG GGTATGATGG AGAATGGTTG
TACGGGAGAG GAAGTGCTGA TTGCAAGAGC TTGTTGATTG GTTTGCTTGA AACAATAGAA
CTCTTATTGG AAGAAGGACA CTTCAATCCT CAGAGAACAA TTGTTCTAGC ATTTGGTTAC
GATGAAGAGT CAGCTGGAAC AGGAGCTGAG GAAATTTCAA AGCATTTGCT TAAAAGGTAC
GGTCCTGACT CGTTTATGCA GATTATTGAC GAAGGCAGTG AAGGCTATGT TCAATTGGAT
GAAGGTGGAG TTAACTATAT CATTCCTTGC ACCAGCGAAA AGGGCCATTT AGACTCTGTG
ATAGAGTTGT ATACACCTGG TGGTCATTCT TCAGTACCTC CCGACCATAC ATCGATCGGT
ATCTTGGCAA GATTGATTGC AAATATCGAA GATAAGCAAT TCGACAGCAT TCTTACCAGA
AACAATCCTC TTTTACACAT GTTGTACTGT TATGCAGATT ACTCGACAGA ACTTGACGAC
TCTTTAAGAT CGGATATCTA CAAAGCACAT TTGGATGTAA AGTCTAACGA AAATGTCATA
GAATTTATCA ATAACTCCCT CAAGCACAAG TATATCATTA CTACTTCTCA AGCCGTTGAT
GTCATCGGTG GAGGAGTCAA GGCTAACGCA TTGCCTGAGC ATGTATCGGT ATTAGTCAAC
CACAGAATTG CTGTAGAAGA AAGTGTTGCT GTGGTTGTGG ACAAAATTGT TGGTCAAGTA
AAAGAAATTG CCGAAAAGTT TAGCTTAGGT GTAATTGTCG ATGGGAAAGT CATTATTGAA
CCCACAGATA ACGGCCATTT TGTATACAAT ACTGTGGGAG CATTGGAACC AGCACCTGTA
ACTCCTAATA ATGGCCATGT TTGGGAAACA TATGGTGGCG CTTTACGTTA CCTCTATGAA
GATTTGATCT TTCCTGAATC AAGCGAGCCC TTCGTGTTTG CTCCTATCAT TGGAACAGGT
AATACAGACA CAAAGTCTTA TTGGGACTTG ACTAAACAAA TTTATAGGTA CCAACCTGGG
TTAGGACAAG TGGAAGAAAA TGCCCATACC GTGAATGAAA AGATTCAGCT TCAATCTCAT
TTCACCATCA TCTCATTTTA CTACTATTAC TTGCAACTTG CTGACAAGTT GAGCGATGAA
TAA
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| Protein sequence | MPEKTLPIYQ SSAKKNHRSS WSRVLLSIAA FSAVVGWWAY SSSITHTSPL ASFLKIDLSS
VFGTFSEPLT SSGLCPTVEK LDPLEFLYNN ETLDRILHDE AFKAKSRERL LGAIRVPTEL
YDDLLNPNSA DTLEDLLEIE PRWKPFIPFH KYLEDTFPLV HKNLKVEKVN KFALVYTWEG
SSNKKPILLA AHQDVVPIQK ESLDQWDYPP YEGGYDGEWL YGRGSADCKS LLIGLLETIE
LLLEEGHFNP QRTIVLAFGY DEESAGTGAE EISKHLLKRY GPDSFMQIID EGSEGYVQLD
EGGVNYIIPC TSEKGHLDSV IELYTPGGHS SVPPDHTSIG ILARLIANIE DKQFDSILTR
NNPLLHMLYC YADYSTELDD SLRSDIYKAH LDVKSNENVI EFINNSLKHK YIITTSQAVD
VIGGGVKANA LPEHVSVLVN HRIAVEESVA VVVDKIVGQV KEIAEKFSLG VIVDGKVIIE
PTDNGHFVYN TVGALEPAPV TPNNGHVWET YGGALRYLYE DLIFPESSEP FVFAPIIGTG
NTDTKSYWDL TKQIYRYQPG LGQVEENAHT VNEKIQLQSH FTIISFYYYY LQLADKLSDE
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