| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28602 |
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| Symbol | |
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| ID | 4851370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1626298 |
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| End bp | 1627851 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640393078 |
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| Product | predicted protein |
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| Protein accession | XP_001387953 |
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| Protein GI | 126274411 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.478127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC CCTTGGTAGA AATGTTCGAT GGATTTCCTA TTTTTCAGCA ATTTACCCTT
GGAAAGCTCC AAGATGCTGA AGTCATGGCA TTTACATCCG TGTACCCCAA TCTCTACTTC
ATGATCAAGC ATTTTGGTAT CGCAGAGGAC GATTCACATA TCGCTACCTA TAGTGGATAT
TTGGGTGCCG CCTATTTACT TGGTGAATAC ATAAGCTCGC TGTATTGGGT CAAAGCTTCG
AATAAATACG GCAGAAAAAC CATACTCTTG TATGGGCTCG CAAGCACAGC ATTCTCCTTG
CTCATTTTTG GATTCAGTAC AAACTTTTAT ATGGCTCTTC TTGCAAGGTT CTTCATGGGG
TTATGCGGTG GTAAGAGTCA AGTCTATAGA AACACAATGG AAGAAATCGC CCTTGAAGGT
AGACATAAAC ATCACGCCTT AACATCACTC TCGCAAAACT GGACTTCTGG GATATTGATG
GGTTACTTTT TTGGAGGATT ATCAAGTCTT TCATATAAGT CTGACATAAA GTATGATGGG
CTGTTACTTT CGAAGTATCC ATTTCTTCTT TCAAACCTTA TAATTATCAG CGTTATTGTA
GCTGAAATTA TCATGGGCTG GCTCTTTTTG GAGGAAACAC ATGAACAGAT AAAGTATGTG
CGAGACATCG GTTTAGAAAA GGGAGATTCC ATTAGGCGTA TGTTGGGATT CCAAGTGCCA
GAGAGACCTT GGCAGCTAAG AGAACAAGAT CCCAAAGTAG ACCAACAACC CTTTGACGAC
AATATGAAGT TGACAGAAAG GCACGTCGTT CCTTACCAAA TAAGAAACGA CCTGGTGTAT
ACCCCCGAAG AACTGTCGAC TGATACAGAA ACATATGAAG AATTTGAGCT GGTGAGATCA
TTGGCTACAT GGAATCGCAT AATTAACAAT TATATGTTAT GCTTTCAGAA TACATTCTTC
TTCGAGTTTT TTCCAATTTT TCTTGCTAGT CCCCTCAGAG AAGGGGATCT AAAGTTCCCA
TTTCAAATTA AAGGGGGATT CAGTTACAAT GCATATGGTA TTGGGATGCT TACATTTCTT
GCGGGATATA TTGGGTCAGT TTTTGAAGTT CCGCTTTCTA TTATTAGAGT GTACTTTGGG
AGAAAGTGTG TGGCTGGAAT TGCCCTTCTC GTATACCCCA TCACTTACTT CTTGTTGCCT
TTATATCTTT TTACACTGCA CGAGTACAAT AAGGGAATAT CCAAGTCGTT GGCAAATTTA
TTACTTGTGG TGAACATTTC TGTTGTTTGG TTATTTAAAT CCTTTACATT CCCCCTGTAT
CAAAGTTATT TTGATATTTC GTCTTCCAAA GAGCAAAGGC GGCCAACTAA TAGTTATTCG
ATTAGATTCA TCACGTTGGC TAAGTGTGCC ACCCCGATTA TTGGAGGCTG GATGATATCA
ATTTTCGATG CGCAAGGATA CGGAGGTACT CCTTGGTGGA TCCTTTCAGT TTGGTCAACC
ATGACATTAT TGCACTCTAT TTACATCGAT AGAAGAAGTG TAGCATTAGC ATAG
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| Protein sequence | MTNPLVEMFD GFPIFQQFTL GKLQDAEVMA FTSVYPNLYF MIKHFGIAED DSHIATYSGY
LGAAYLLGEY ISSLYWVKAS NKYGRKTILL YGLASTAFSL LIFGFSTNFY MALLARFFMG
LCGGKSQVYR NTMEEIALEG RHKHHALTSL SQNWTSGILM GYFFGGLSSL SYKSDIKYDG
LLLSKYPFLL SNLIIISVIV AEIIMGWLFL EETHEQIKYV RDIGLEKGDS IRRMLGFQVP
ERPWQLREQD PKVDQQPFDD NMKLTERHVV PYQIRNDLVY TPEELSTDTE TYEEFELVRS
LATWNRIINN YMLCFQNTFF FEFFPIFLAS PLREGDLKFP FQIKGGFSYN AYGIGMLTFL
AGYIGSVFEV PLSIIRVYFG RKCVAGIALL VYPITYFLLP LYLFTLHEYN KGISKSLANL
LLVVNISVVW LFKSFTFPLY QSYFDISSSK EQRRPTNSYS IRFITLAKCA TPIIGGWMIS
IFDAQGYGGT PWWILSVWST MTLLHSIYID RRSVALA
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