| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28554 |
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| Symbol | BOT2 |
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| ID | 4851327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1512623 |
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| End bp | 1514290 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | |
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| GC content | 39% |
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| IMG OID | 640393035 |
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| Product | Cell wall endo-beta-1,3-glucanase |
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| Protein accession | XP_001387934 |
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| Protein GI | 126274368 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5309] Exo-beta-1,3-glucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.496398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATA TAAACGCTGA AGATTTGCGC CCACCTCGGG TTCGGAGATC TGCCACGGAT
TCTCACCTCT TAACTGAAGG CTTTGGACTA GACTCTGCTG AAGGACGCCC AGTTTACAAA
AAATTAGAAG CATACAAATT GACTCGCTCC AGATCTAACA ACTACTTCCT GTCTTTATCT
GACTCACCAA ATCCAGAGGA GTGGACTTCT TTTCAATTAA GCAAACAAAT AGAAACTCCC
AAATCTTCTG GTCATCCATT ACTGGCAGCT AGGTATCCTT CTGTTCTCCG CCATGATAAA
ACACCAGGTG TGGAAAAAAT AGAGCTAGAA GTAGTTTCTC CTTTAACAGA AAATCCTCTG
CTTGCCACAA CTTCAAATAT CAGCCCTAAT AACAATGGAG CCGGAGGGGG CTATGGTATA
CAGAAATATT CTCTTCCATA TTCAAGTTTG TTGTCTCCCA TAGAAACAAA CTCCAAAAAT
GGATTTTCGA GATTTCACGA AGCAACTACC GGCATTGAAG AAAAGGAATC TCAGAACTCT
CCGGAGAGCT TTTCCAGAGA AAATGAAGCT AGTAAAAAGT TCAAATTGAC AAGGCTGCTG
CTTCTTAATT TTGTACTTGT TGGATTAATT ATTCTCTTAA TATGTGCGTT CGTCCCACCA
ATGGTAATAC TTTCCGGTGG TACAAAAGGT AGCGTTCTGA AATTCTTTAG AAAAGAAGGC
AACAGGAATG AAATGCTTCC AATGTTGATG GAAAAGTATG GCTACTTGAA TCAATCAAGA
CCAGGAATCA GTGAAGTGTC TTATAAGGTT GAGAAGCCAG AGGATCCCTA TTTGTTTGGT
TTAGCATACT CTCCTATAAA CGCTTTGGAA CCAAGGTGTG GGCTAACTAA GAATGAGGCT
ATTCTTGATC TATTGGCAAT GCAAACTGTC ACAGGGAGAA TAAGAAACTA CGGAATGCAG
TGTAATCAGT CTGAGTTGAT TCTTGATTCA ATCCAATCCC TCAACTTAAA TATGAAATTA
GCAATGGGAG TGTGGATAGG CACCAGTGAT AAGATAAATG ATGATCAGAT GAGAACAATG
AAATCTGTGC TTTCTAGATA TCCTAGGAAT CTCTTTGAAT CTATCTTTGT GGGAAATGAA
GTATTGTTCA GAGGGGACAA AACAACAAAG CAATTACTCA GCTATATTAA TGAAACAAGA
CAATTTGTCC ACTCCTTGGG TTATGATATA CCAGTTGGGA CATCTGAAAT TGGGTCCTTG
ATCAACACTG AACTTATTGA GGGCTGTGAT ATTATAGGTG CAAATATCCA TCCTTTCTTC
GGCGGAGAAG AAGTCGAAAA GGGAAGTGAA TGGACCTTAG ATTTCCTCAA GTACCAAATA
GAGCCCATCA ATTCTAAAAA CACAACTATT GTTATTACAG AAGTTGGATG GCCCAGTAGC
GGAGGAAGAT ATCAGAAGGC ACTAGCTAGT ATTCCCAACT TAAAGTATCT TTTGGAGGAC
TTCCCATGCA AGGCAAGGGC AAGTGGATAT GGATATTATT TCTTTGAGGC TTTTGATGAA
CCTTGGAAGA AAGTATTCTA TTCCGGAAAA AATAAATGGG AGACCGAATG GGGAATATTT
GATAAAGATA GAAAGAAAAA AGTTGACTTC AAGAGTTTTG GATGTTGA
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| Protein sequence | MEDINAEDLR PPRVRRSATD SHLLTEGFGL DSAEGRPVYK KLEAYKLTRS RSNNYFLSLS
DSPNPEEWTS FQLSKQIETP KSSGHPLLAA RYPSVLRHDK TPGVEKIELE VVSPLTENPL
LATTSNISPN NNGAGGGYGI QKYSLPYSSL LSPIETNSKN GFSRFHEATT GIEEKESQNS
PESFSRENEA SKKFKLTRLL LLNFVLVGLI ILLICAFVPP MVILSGGTKG SVLKFFRKEG
NRNEMLPMLM EKYGYLNQSR PGISEVSYKV EKPEDPYLFG LAYSPINALE PRCGLTKNEA
ILDLLAMQTV TGRIRNYGMQ CNQSELILDS IQSLNLNMKL AMGVWIGTSD KINDDQMRTM
KSVLSRYPRN LFESIFVGNE VLFRGDKTTK QLLSYINETR QFVHSLGYDI PVGTSEIGSL
INTELIEGCD IIGANIHPFF GGEEVEKGSE WTLDFLKYQI EPINSKNTTI VITEVGWPSS
GGRYQKALAS IPNLKYLLED FPCKARASGY GYYFFEAFDE PWKKVFYSGK NKWETEWGIF
DKDRKKKVDF KSFGC
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