| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28472 |
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| Symbol | MAK5 |
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| ID | 4851250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1311668 |
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| End bp | 1314178 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640392958 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | XP_001387897 |
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| Protein GI | 126274236 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases
[COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.196096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCCTA ATAATAAGAA AATCAAAGGC AAGAGCAATG TGGGTAAAGG CTCAAAGAGT
AAAAAAGGCC AACAGACCAG AAAGACCCCA ACTTTGAAGC AGAAATTGCA CCGCGAATCA
AAAGTAGTGA AGGCAGAAAG TTTGAATTGG AAGACTGTAG AGGTTCCCGA CAATTTGGAT
GACTGGGAAG GCTTTTACGG TTTGGAAGAA ATTGATGGTG TAGATGTGAA GATTGTTAAT
GGAAAAGCTG AATTTATTGT GAAGGACAAT AAGAAAGTAA AAAAGGGTAA GACAGAAGAA
CAAGAAGAAT TGGAGGACGA TGAAGAACAA GACGAAGACG AAGAACTGGA GGCAGATGAA
GAGCAAGGAG AAGATGAAGA TGAAGACGAA GAACATGAAG AAGATAAAAT AAACGAAGAG
AATGAAGATG AATTTGAAGA AGAAGAATTC ACTGGTTTTG ATGATGACAG TGAAATTCAA
GATGGCATGG AAGTGGAAGA TATTTTGGAT GAAGATATCA ACGAAATCGG AGAAGTCGAC
GAAAGTGTTG AACCAGTTCA AGAAAGCAAA CCTGAACATG ACGAAGAATT GTCGGAGAAT
GTTTTCCAAC ATTCTCAGTT TGTCTTACCA GACGACGAAG ACATTAACCT TCCACACTGG
CAAAATGAGG ATTCCAACTT CTCGTTATCT CCTTACACTT TGCATGGTTT GTCAGTTCTT
GGATTCGATA AACCCACTCC AATTCAAAAG AAAACCATTC CTTTGGCAGC AGAAGGAAAA
GATGTAGTAG GAAAGGCTAT CACTGGTTCC GGTAAGACTT TAGCCTACGG TATTCCGATC
TTGGAAAAGT ACTTGTCCAA CCTCTCTATC ATTAACCAGA ATAGACAGAA GAAGATTATC
AACCATCCCA CTGGTATAAT CTTCGCTCCC ACCAGAGAAT TAGCCCATCA GGTTGTTAGT
CATCTTAATT CTCTTGCCAA ATACTCTCCT CTATCTACTA ATGGTATTGT AAGTATCACT
GGTGGTTTGT CCATTCAGAA GCAAGAAAGA TTATTATCCC ATGGACCTGG TATTATAGTA
GCCACTCCTG GTCGTATCTT AGAATTGCTC CAGAAAGATG AAGATCTCAC AAAAAGATTG
GCTTCTACTG ATATCATCGT ATTGGACGAG GCTGACAGAT TATTACAGGA TGGACATTTT
GAGGAATTTG AGACTATCTT AGATTTGTTC CGTAAGAATA GACCCAAGAA TAAGACTTTT
CCATGGAAAT GGCAGACGTT GGTTTTCAGT GCTACCTTCT CCAGAGACCT TTTCGGCAAG
CTCGACAAGA ACCAGAAATC GCACAAGAGG AATTCTGAAG GAAGTTCGTT AATCGGTAAC
GACGAAATCT TGAATTTGCT TAACGATAAA TTAAAATTCA AAGATACCAG ACCGGCTCTT
GTAGATGCTA ACCCTAAGGA AATCGTGTCA GGTAATATCA CAGAAGCTTT AGTTGAATGT
GGACCAACTG AAAGAGATCT TTACTTATAC TACTTCTTGC TCATGTATAA GGGATCCACA
TTAGTATTTG CCAACTCTAT TGACTCTGTG AAGCGTTTGG TACCTTTCCT CAACAACTTG
AATATCCCGG CATTCGCCAT TCACTCATCT ATGATCCAAA AACAGAGATT GAGAGCTTTG
GAAAGATTCC AGAAGGCCAG CGAAAAGAAC GACACTGCCG TACTTATTGC TTCTGATGTT
GCTGCTAGAG GTTTGGATAT TCCAAACATT GACCATGTAG CTCATTACCA TTTACCTCGC
TCTGCTGATG TCTACATTCA CAGATCTGGT AGAACTGCCA GAGCTGGCAA GGAGGGTGTT
TCTGTGATGT TCTGTTCTCC ACAAGAAGCT TCAGGACCTC TTAGAAAGTT AAGAAGATTG
GTGGCTAACA ACTCTACCAA AGGAGGTAGA TTAAACATGC ACAACGATGT TAAGTTGTTA
CCTATCGAAA TGGATCTTGT TTCTCAATTA AAACCAAGAG TTATCATAGC TTCCAAATTA
GCTGATGCTG ACATTTCCAA CACTTCCACC AGAAAGGAAG ATTCGTGGGT TAAACAAGCT
GCTGAAGAAC TTGGAGTGGA TGACTTGTCA GATCTTGACG ACTTTGAAGA TGATATTATA
AAGAAGCAGA GAAAGAGAAA AGAAGGAAAA ATGATCACTA AGGATGAGAA GAAGGGATTG
AGATACGAGT TGAAAGAATT ACTCAGCAAA AGTATTAGAA AGGAAACTAG AAGATCTTAT
TTGACCAGTG GATTACAAAA CATTGCCCAT CAGATGGTTA CTGGAGTTGG CCATGAGGAT
GTTGTCGGCC ATTCAAAGGT CAATGCTTTA GATGACTTGA AGGGTAAGAA AGTTGCCAGG
TCCAAAGCTG GTAAAGTCAC CAAGCCAAGC CAGAAGAAGC AAGAAAAAAA GCAGAAAAAG
CAAGAGAGAA AGGATACGAT GAGAAAACAG AAAGAAGGAA ATAGAAAATA G
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| Protein sequence | MAPNNKKIKG KSNVGKGSKS KKGQQTRKTP TLKQKLHRES KVVKAESLNW KTVEVPDNLD
DWEGFYGLEE IDGVDVKIVN GKAEFIVKDN KKVKKGKTEE QEELEDDEEQ DEDEELEADE
EQGEDEDEDE EHEEDKINEE NEDEFEEEEF TGFDDDSEIQ DGMEVEDILD EDINEIGEVD
ESVEPVQESK PEHDEELSEN VFQHSQFVLP DDEDINLPHW QNEDSNFSLS PYTLHGLSVL
GFDKPTPIQK KTIPLAAEGK DVVGKAITGS GKTLAYGIPI LEKYLSNLSI INQNRQKKII
NHPTGIIFAP TRELAHQVVS HLNSLAKYSP LSTNGIVSIT GGLSIQKQER LLSHGPGIIV
ATPGRILELL QKDEDLTKRL ASTDIIVLDE ADRLLQDGHF EEFETILDLF RKNRPKNKTF
PWKWQTLVFS ATFSRDLFGK LDKNQKSHKR NSEGSSLIGN DEILNLLNDK LKFKDTRPAL
VDANPKEIVS GNITEALVEC GPTERDLYLY YFLLMYKGST LVFANSIDSV KRLVPFLNNL
NIPAFAIHSS MIQKQRLRAL ERFQKASEKN DTAVLIASDV AARGLDIPNI DHVAHYHLPR
SADVYIHRSG RTARAGKEGV SVMFCSPQEA SGPLRKLRRL VANNSTKGGR LNMHNDVKLL
PIEMDLVSQL KPRVIIASKL ADADISNTST RKEDSWVKQA AEELGVDDLS DLDDFEDDII
KKQRKRKEGK MITKDEKKGL RYELKELLSK SIRKETRRSY LTSGLQNIAH QMVTGVGHED
VVGHSKVNAL DDLKGKKVAR SKAGKVTKPS QKKQEKKQKK QERKDTMRKQ KEGNRK
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