Gene PICST_28444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28444 
SymbolGON5 
ID4851222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1237345 
End bp1237593 
Gene Length249 bp 
Protein Length82 aa 
Translation table 
GC content49% 
IMG OID640392930 
Productmitochondrial ribosomal L36 protein 
Protein accessionXP_001387467 
Protein GI126274208 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0257] Ribosomal protein L36 
TIGRFAM ID[TIGR01022] ribosomal protein L36, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0515598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0876334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCTT TCACTTCTAT AATAAGAAAG CAGATTGTCG CACCAGCTGC GGTTAACCTT 
TTCAGAGCTA CTCCAACGGT GGCTGCTCCA CTTTCGGGTG CCGCCCCAGC TTCTCTCGGT
TTCTATAGAG GCTTCAAGGT CAGAACCTCC GTCAAGAAGT TCTGCAAGGA CTGCTACATG
GTCAGAAGAA GAGGAAGAGT GTATGTCTAC TGCAAGTCAA ATGGCAAGCA CAAGCAGAGA
CAAGGATAG
 
Protein sequence
MFAFTSIIRK QIVAPAAVNL FRATPTVAAP LSGAAPASLG FYRGFKVRTS VKKFCKDCYM 
VRRRGRVYVY CKSNGKHKQR QG