| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28404 |
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| Symbol | PRD1.2 |
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| ID | 4851181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1134745 |
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| End bp | 1136808 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392889 |
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| Product | saccharolysin (oligopeptidase) |
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| Protein accession | XP_001387447 |
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| Protein GI | 126274167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0460468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCG ATTTCATTGC GTTAGCTAGT AAAGAATCGT ATCCATTATG GAATCACACT
GTCGAGGATC TCGAAAGACT TGCTAACCAA TTGGTTAACG AAGAGAAGGA GACCTACGAT
TACATTGCTA CAATTGAGAA TCCTACCATT GAGAATGTCG TCAAGCCCTA TGCCAGATAT
CTGCACAAGA ATGCTCTTTT AGAGAACCAA ATCACCTTCT ATCAGTATGT CTCTGCCTCG
AAGGACTTGA GAGATGCTTC TACTAGGGCC GAAGAGCAAT TGGAACAGGC ATCCATCGAG
CAATCGCTCA GAGTAGATGT CTTCCAGGTG TTCAACAAGT TGTACGAGTC AATCAAGGAC
GAGAACGACA TCGAGCCTGA AACCAAGAGA TTGGTAGATA AAGTAGTTAA GTACTATAAG
AGAAATGGTT TGGCTTTGCC TGAAGAACAG CGTGAGGAGA TCAAGAGGTT GAAAAAGGAG
TTGTCCACTT TATCAGTCAA ATTCTCCAAG AACATGAATG AAGAAAAAGA CTTCATTCTC
TTCACCACTG AAGAATTGGC TGGTGTACCT TTGGATGTCG TGGACCAGTA TGAAAAAGTT
GAAGAAGACG GTGTTCAAAA ACACAAGATG ACCTTCAAGT ACCCTGATCT TCATCCTGTT
TTGAAACATG CAACCAATCA GGAAACAAGA AAGAGAGCAT TTATTGCCAA CCAGAACAAG
TGTCCAGCCA ATGCTGAAAT CTTGGACACG ATTATCAGGA CCAGATTCGA GTTGGCTAAG
AAGTTGGGTT ACTCCACATA CTCCGAATAC GTTTTGGAAG ATAGAATGGC TAAAACCCAG
AAGAATGTTT TGGACTTCTT ATACGACTTG AAGAGCAAGT TAGTTCCCCT TGGCCAGAAA
GAAATTGCCA ACATGAAAGA ATTCAAGAAC AAGGATTTGA CTGCTAGAGG ATTGGAGCAA
CAGGATAAGT ACTACATCTG GGATTCCAAC TTCTACAATG AACTCTTATT GGAAAAGGAA
TACAAGGTCG ATAATACCAA AATTTCCGAG TACTTCCCCA TGGATGCTAC CATCGATAAG
ATGCTTGGTT TCTACGAAAC TTTGTTCGAC ATGAAGTTTG TCAGAATCGA CAAACCGGCA
GATGGAGCTA CGTGGCATGA AGATGTCAAA CAGTTTGCTG TGTACCAAAA CATCAAGTAC
GGTGAACCTA AGTTGGAATT CATGGGCTGG ATCTATTTTG ATTTGCACCC AAGAGAAGGC
AAATATAGTC ATGCTGCCAA CTTCGGTATT GGTCCTGGTT ACTTGGATGA AGATGGAGTT
ACCAGACACA CTCCAGTCAC TACCTTGGTG TGTAACTTCA CCAAGCCTAC AGCTGAGAAA
CCTTCTTTGT TGAAACACGA TGAAGTCACT ACATTTTTCC ACGAATTGGG CCATGGTGTG
CACAACATCT TGTCCAAGAC TAAATATGGT AGATTCCATG GTACTCATGT TGAGAGAGAT
TTTGTAGAAA CTCCATCACA AATGTTAGAG TTCTGGACTT GGTCAAAGAA TGAACTTAGA
AACTTATCTT CTCACTTCCA AACTGGAGAA CCAATCAACG ACGAGTTGAT TGACCAATTG
ATAAAGTCAA AACATGTCAA TACTGGCTTG TTTAACTTGC GTCAATTACA CTTTGGCCTC
TTTGATATGA AACTTCATAC CACTGCAACC AAGGAGGAAT TAGATGAGTT GGACTTGACC
AAGGAATGGA ATGAGATGCG TGATGAGATT GCTTTAGTCG ACAGCGACCA TATTCCCACC
AAGGGCTATT CGTCATTTGG TCACATTGCC GGGGGTTATG AAAGTGGTTA CTACGGCTAC
TTGTACTCTT CTGTGTACTC GGCTGATATC TACTACAGTT TATTCAAAAA AGATCCTATG
AACGTTGAGA ACGGTATCAG ATACAGAGAT ATAATTTTGA AGAGAGGTGG TTCCCGTGAA
ATCATCGACA ACTTGGTCGA GCTTTTGGGC AGACAACCTA ACTCTGATGC CTTCTTGGAA
GAAATCTTTG GTGGACAGCA ATAG
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| Protein sequence | MTTDFIALAS KESYPLWNHT VEDLERLANQ LVNEEKETYD YIATIENPTI ENVVKPYARY
LHKNALLENQ ITFYQYVSAS KDLRDASTRA EEQLEQASIE QSLRVDVFQV FNKLYESIKD
ENDIEPETKR LVDKVVKYYK RNGLALPEEQ REEIKRLKKE LSTLSVKFSK NMNEEKDFIL
FTTEELAGVP LDVVDQYEKV EEDGVQKHKM TFKYPDLHPV LKHATNQETR KRAFIANQNK
CPANAEILDT IIRTRFELAK KLGYSTYSEY VLEDRMAKTQ KNVLDFLYDL KSKLVPLGQK
EIANMKEFKN KDLTARGLEQ QDKYYIWDSN FYNELLLEKE YKVDNTKISE YFPMDATIDK
MLGFYETLFD MKFVRIDKPA DGATWHEDVK QFAVYQNIKY GEPKLEFMGW IYFDLHPREG
KYSHAANFGI GPGYLDEDGV TRHTPVTTLV CNFTKPTAEK PSLLKHDEVT TFFHELGHGV
HNILSKTKYG RFHGTHVERD FVETPSQMLE FWTWSKNELR NLSSHFQTGE PINDELIDQL
IKSKHVNTGL FNLRQLHFGL FDMKLHTTAT KEELDELDLT KEWNEMRDEI ALVDSDHIPT
KGYSSFGHIA GGYESGYYGY LYSSVYSADI YYSLFKKDPM NVENGIRYRD IILKRGGSRE
IIDNLVELLG RQPNSDAFLE EIFGGQQ
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