| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28287 |
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| Symbol | RTA2 |
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| ID | 4851063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 853129 |
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| End bp | 854673 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640392771 |
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| Product | putative transporter or flippase transmembrane protein |
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| Protein accession | XP_001387796 |
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| Protein GI | 126274049 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTTAA GTCTTGCCAA CCAGTATATC ACATCATGGA CACCCAAGTC CGTGCCCACC
TCGACGTCGT TGAGCAGCAT CGACCCTACA GCATTGCCTG CATTATTGCG GACTATTTCT
CAGGTAGCCC AATCGGCAGC TACTGAAACC AATAGCATTT CCCTCTACTT TCTCTCCAAG
AAGTACAGAG GAGCAGCTGC TTCCTTGACC ATAGTTGCTG GAGAGAAGTA TATAGCGACA
GCCACCAGAG CCACCGACTT GCCCGAAGTG ACCGCGGCCA TGTTCAATGC CACATTAAAC
TTGAAACTGT TGGAATGGCT GAGCAACTTG TACGCCATGA ACCTTAACGT GCCAGCCAAT
GCACTCTTCA CAGCCCTTTT CGGGATCGCA CTCATTACCC AGATTGTCTT GTCCTTCAAG
TTAAAGGCCA AATACTTTGG CTTCTGCATG TCCTCTGCCA CTCTCTTGGA ATTCATAGGA
TATCTCGCCC GTACCTTGGC TGCACAGGAT ACCACCAACC AGAGCAAGTA TCTATGCCAG
ATCATTTGTC TCACTATTGC ACCAGCATTT GTCATGGCAG GAATTTACTA CCTTCTAGCC
TTGCACATTG TAGTGCACGG GCGGCGGTTT TCGGTTTTGG AGCCAGTGTG GTTCTCGTAT
ATCTTCATAT TCTGTGACAC TACCAGTTTA TTCGTCCAAG GAATAGGTGG TGCCTATGCA
GCTATAATGC TCAAGCAATT CCGGCCAACG GCTGTGGGAA CACATGTTAT GGTAGGGGGA
ATTGCTTTCC AGGTGTTGTC AATGACATTT TTCCTCTATC TCAACTGTGA CTTCATAAAG
AGGAACTACT TTGGAGAAGA TAGTGATACT CCCTTCAGTT TCCTGGTCCT TTTCCGACTC
TTGTTCAATA CCCATACGGG AAGGGAAATC AAGGAACTGA TGGACTATCG ATACAATTCA
AAGTATAAGC ATATCCGTTC CAAAAGGTTG TTTCAATATT TTCCTTTAGT CATGTTGTTG
TCTTTGGTCT TTGTCTATGT GCGGTGCATT TACAGAGTAG TCGAGTTGTC CGAAGGCTGG
AGAGGGTATT TGATTACGCA TGAGGCATTT GTTCTTAGCC TTGATGCAGC TATGATCTTT
CTCGCTTGTG CACTCTTTAT TCCTTTTCAT CCTGGGCTCG TCTTTGGTAA TGACGAATCC
CTTTCTTTAA AAGCAATCTT ACACGAAAGG GACTTGGATC ATGAAGACTG TGAATCCAAC
AAGATGAAGG CTGTCTCCAG AAAGAGGCAC ACTAAGAAGA ATAAGCGTTC AAGTAGAGGG
TCGGACACCG AATACGAGGA GTATACGCAA ACTCACTACG AAGTCAGTCT GGACAATCCA
TTCCTTGACA GCGCTGTTGA GTACCCACCA ATGGCTTTCA ACCCCTACAC AAAAGAAACC
ATGCACGTAA AGAGCATGAG TCAGTCTAGT TATGAGGGCC TGAATACATC TACTTTGAAT
GAGAGCGACG AAGATTCGTT CTACTTTCAC ACTGCATCAC GATAA
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| Protein sequence | MDLSLANQYI TSWTPKSVPT STSLSSIDPT ALPALLRTIS QVAQSAATET NSISLYFLSK
KYRGAAASLT IVAGEKYIAT ATRATDLPEV TAAMFNATLN LKLLEWLSNL YAMNLNVPAN
ALFTALFGIA LITQIVLSFK LKAKYFGFCM SSATLLEFIG YLARTLAAQD TTNQSKYLCQ
IICLTIAPAF VMAGIYYLLA LHIVVHGRRF SVLEPVWFSY IFIFCDTTSL FVQGIGGAYA
AIMLKQFRPT AVGTHVMVGG IAFQVLSMTF FLYLNCDFIK RNYFGEDSDT PFSFLVLFRL
LFNTHTGREI KELMDYRYNS KYKHIRSKRL FQYFPLVMLL SLVFVYVRCI YRVVELSEGW
RGYLITHEAF VLSLDAAMIF LACALFIPFH PGLVFGNDES LSLKAILHER DLDHEDCESN
KMKAVSRKRH TKKNKRSSRG SDTEYEEYTQ THYEVSLDNP FLDSAVEYPP MAFNPYTKET
MHVKSMSQSS YEGLNTSTLN ESDEDSFYFH TASR
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