| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28027 |
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| Symbol | |
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| ID | 4850813 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 126494 |
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| End bp | 128043 |
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| Gene Length | 1550 bp |
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| Protein Length | 401 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640392521 |
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| Product | predicted protein |
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| Protein accession | XP_001387680 |
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| Protein GI | 126273565 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTTT GTAATTTAAC TATGGCACCT CAGTCCGGCC CTGATCAAAA ATGTGGGGGC
TTTCACATGA CTAGCCTCGC TTATGTCGCC ATAGTAATTT CCAAGTCAGC TATTCTTCTC
CAATTGTTAA TTGTGTAGAT TCTGTTTGGT AACGAAACCA ACTCATTCCT TCCCAATTCT
GCTCAATTCG TGCCAATTGA TAAGATAGTG CTCATCTGTA GGAACGGAAC TTTTCAGAAA
ATTCAATTCC CATTGCTAGC CATAAGAAAT TCTCAATTGC TTGCAAATTC AAGATATTCA
TAACATTCCT TCTGAAATCG TATCATAACT CCTTACATTC GATATACCTA CTTCTATCTC
CTTTTTTGTT CGAAATGAGA CTCTTGAATC TTTCAATATT CACTTCAATT TTCTCGAATC
TGTTCTTAGG TCAACAGTCA TTCTCCTTAG ACCAGCAAAT CCCCCAGATC CAGACTACCG
AATTCGAGGG CCTAGAAGAC GTCCATGTCA ATGGCTTGTC GTTGCTCTCA TTCCATAAAC
AGCTAGTGGA AATCGACCTG ACTTCTAATC ACGAGCATAC AGCCTCGCTC TACTTGAAGC
AGTTCCTCGA GAACGCTGGT CTCACTGTGG AACTCCAGCC TATCCATGAC AACTACGAGA
TCAGGTACAA TGTCTACGCC TACTATGGAA AAACAAGGGA TACCAAGGTT GTGGTGACGT
CTCATTTTGA TACCGTTCCT CCCTACATTC CTTACTCCAT TAATGGCACC AAGATCTTTG
GCAGAGGCAC ATCTGATGCC AAAGGCTCTG TAGCTTCGCA GACTTTCGCA TTCCTTTCGC
TTCTTGAAAA CAACGAAATC AAGGAAGGAG ATGTCTCGCT TCTCTTTGTA GTCGGCGAAG
AAGTCTCGGG AACAGGAATG CTTGAGGCTA ACAACTTGGG TGCAAAATGG GACATTGCTA
TATTTGGTGA ACCAACAGAA TTGAAACTTG GAGTCGGCCA TAAGGGTGCT GTAGTGTTCA
CTCTTGATGT CGAGGGACAT GCCTCTCACA GTGGATATCC CCAATTGGGC ATTTCTGCTG
GTGAAATCAT CATTCCTGTC TTAAACAAAT TGATAAACTC CGAGTGGCCC GTAGACGATA
AGTTAGGACC ATCCACTCTC AATATTGGTA GGTTCGAAGG AGGTGTAGCG GCCAACGTGA
TCCCAGCACA CGCTTCAGCT CAGGCTCTAA TTCGTGTTTC TGGTCAATTA GACAGAGTCA
TCGAGCTCAT TGAAGAAGCT GCTGCTGATA TTGACCATTT GACTTTAAAT ATTAGAAGCA
AAGCTGAACC AGTCTACTTG GACTACGAAG TGCCGGGCTT TGAGTCAATC GTGTTAGCCT
ATTTCACAGA CGTGCCCAAC TTGAAGCTCC CATTGAAGTC TCGCTACTTG TACGGTCCTG
GAACTATTCT CGTTGCTCAT GGAGACGACG AATATGTAGA GAATCTGGAT TTGGTAGAAG
CTGTAGATGG CTACAAGAGA TTAGTTGCCC ATGCTCTTTC CGAATTGTAA
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| Protein sequence | MALCNLTMAP QSGPDQKCGG FHMTSLAYVA ISFSLDQQIP QIQTTEFEGL EDVHVNGLSL
LSFHKQLVEI DLTSNHEHTA SLYLKQFLEN AGLTVELQPI HDNYEIRYNV YAYYGKTRDT
KVVVTSHFDT VPPYIPYSIN GTKIFGRGTS DAKGSVASQT FAFLSLLENN EIKEGDVSLL
FVVGEEVSGT GMLEANNLGA KWDIAIFGEP TELKLGVGHK GAVVFTLDVE GHASHSGYPQ
LGISAGEIII PVLNKLINSE WPVDDKLGPS TLNIGRFEGG VAANVIPAHA SAQALIRVSG
QLDRVIELIE EAAADIDHLT LNIRSKAEPV YLDYEVPGFE SIVLAYFTDV PNLKLPLKSR
YLYGPGTILV AHGDDEYVEN LDLVEAVDGY KRLVAHALSE L
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