Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4004 |
Symbol | |
ID | 4845069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4692923 |
End bp | 4699642 |
Gene Length | 6720 bp |
Protein Length | 2239 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640121267 |
Product | putative outer membrane adhesin like proteiin |
Protein accession | YP_001052340 |
Protein GI | 126176191 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01965] VCBS repeat [TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.328168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATCGG TAATTACATC AAAGAAAGGT TTGCTTAAGT TAGTAAAAGG GCAAATCAAT GTCGAAGTTG ATGGTTCAAA TCAACCCGCT AAGGATGGCG AACAACTCCC TAAAGGTGCT GTGCTCCATA TTGACGAAAA CGCAACCTAT GAGATCACCT TCGATGATGG CACTAAGCTA TCGAACGAAG TTGTCCCCAA TGAAACTGCA ACAGTAGCCA CCAACACCAC TGACGGGGCT GCCTTAGCTG AAATCCAAGC ATTACAAGAT TTAATCGCCT CTGGTGAAGA CCCAACTCAG AACCTTCCTG AAACCGCAGC GGGGAACACT CCAGGCCGTG ATGGTAACTC TGGCTATGTC ACTCTCGCTC GCAGTGGTAG TGAAGTCTTA GCCACATCAG GATACTCAAC CACTGGTCAA GCACTCACCG CGACTTCAGC CAATACTCCT GCACAAACTT TAGCTATAGA CTCTCCTTCA GTAGTAGTAA ATGACAGCAA TACTATCGAT GAAGATACTG TTGCTACTGG TAATGTGCTC GATAACGACA GTGATGTGGA TTCTATTTTA AGTGTTGTGA GCTTTGAAGT TGATGGTACA ACTTACGCAG CTGGCACTGA AGTGACTCTC GAAGGCGGCA CTTTAGTCAT TAACACTGAC GGCTCATACA CCTTTACACC AAATGAAAAC TGGAATGGCC AAGTTCCTGT CATTACCTAC ACAACTAATA CAGGCTCAAG CGCAACTCTT ACAATTAATG TCACTGCTAT AAACGATGTG CCTGTGATTG CCGGCGACGA TGTTGGCGCG GTGATGGAAG ACGCCACCGA TCCCATTCTG ACTGACAGCG GCACCTTGAC CATTACCGAT GCCGACAGCG GCCAAGCGGT GTTCCAAGCG GGCAGCGGCA CTCCGAGTGT TGGCGCGCTC GGCAGCTTAA CCATTGATGC GACGGGCAAC TGGACTTACA ACGTCGATAA CGCCGACGTG CAATACCTGG CCGAAGGCGA AACCAAGGTC GAAACCTTTG TGGTACTCAG TGCCGATGGC ACTGAGCACA CCGTCACCAT CACCATTACT GGCACCAACG ATGTGCCTGT GATTGCCGGC GACGATGTTG GCGCGGTGAT GGAAGACGCC ACCGATCCGG TTCTGACTGA CAGCGGCACC TTGACCATTA CCGATGCCGA CAGCGGCCAA GCGGTGTTCC AAGCGGGCAG CGGCACTCCG AGTGTTGGCG CGCTCGGCAG CTTAACCATT GATGCGACGG GCAACTGGAC TTACAACGTC GATAACGCCG ACGTGCAATA CCTGGCCGAA GGCGAAACCA AGGTCGAAAC CTTTGTGGTA CTCAGTGCCG ATGGCACTGA GCACACGGTC ACCATCACCA TTACTGGCAC CAACGATGTG CCTGTGATTG CCGGCGACGA TGTCGGCGCG GTGATGGAAG ACGCCACCGA TCCCATTCTG ACTGACAGCG GCACCTTGAC CATTACCGAT GCCGACAGCG GCCAAGCGGT ATTCCAAGCG GGCAGAGGCA CCCCGAGTGT CGGCGCGCTC GGCAGCTTAA CCATTGATGC GGCAGGCAAC TGGACTTACA ACGTCGATAA CGCCGACGTG CAATACCTGG CCGAAGGCGA AACCAAGGTC GAAACCTTTG TGGTACTCAG TGCCGATGGC ACTGAGCACA CCGTCACCAT CACCATTACC GGCACCAACG ATGTGCCTGT GATTGCCGGC GACGATGTCG GCGCGGTGAT GGAAGACGCC ACCGATCCCA TTCTGACTGA CAGCGGCACC TTGACCATTA CCGATGCCGA CAGCGGCCAA GCGGTATTCC AAGCGGGCAG CGGCACCCCG AGTGTCGGCG CGCTCGGCAG CTTAACCATT GATGCGGCAG GCAACTGGAC TTACAACGTC GATAACGCCG ACGTGCAATA CCTGGCCGAA GGCGAAACCA AGGTCGAAAC CTTTGTGGTA CTCAGTGCCG ATGGCACTGA GCACACGGTC ACCATCACCA TTACTGGCAC CAACGATGTG CCTGTGATTG GCACCACGAC CAGTGCCATA GTTTCGGAAG AAGGTTTAAC TCCTTTAGGT TTACCTGACA CAACAGGAAA TACAGATACA ACCAACAGCC CAACGGCGAC AGGTACGATT AATATCCAAG ATGTTGATAG TGATTCTTTA ACTGTGTCAC TGTCTGGACC TACAGGATTA TTATCTGGTG GCCAAGCAAT TCAATGGAGT TGGGATCCTG TCACGCAAAC TTTAACGGGT TATATTGGTA CTGCAGGTGA GGCTTCATAT ACCGAAATTA TGACTGCAAC ACTGACGCCA CCGGTTACTG GTAGTTCAGG AAATTGGACC TATGATGTCA CGCTTAAAGG TCCTGTCGAT CATCCAGATA CTGAGACAGA AGACACCTTG TCAGTCAATA TTGGCATCAA TGTTAATGAT GGCCATGGTG GTACATCAAC TGGAAGTTTC AATGTCACCA TTGAAGATGA TGCTCCAGTC ATATCACCAA TTGCAGCCGT GCAAACCACA ACGACAAGTA TTCCTGATTC ATTGGTGGGT TCATTCTCAC TCACTGGTTA CAGCGGCAAC AATAATTCAT TAGATTTCAA TGGATTTACA ATCAGTGCAA GAGGATTCAC TTCGTCAACT AACTCAAATT TAATTGATGC CGCAATCTTT GGTAGCGGTA GTGGGATAGA TGTTAGTAGC GCTGGTGCTC CTTATCATAA TCTCGCGAAC GAAGTCGATT TCCGTAAATT TGCAGATGGA AGTTCTGCAT CTGAAGAAAT CATCATTACT CTCGATCCTG GAACTATTGC CTACGGCGTA AATATCCAGT TTTCCCACAT GTTTGGTGGC GAACTAGAAG TCGGTGTCGT CGAGTTTTGG CGAGATGGCC AACTTATCGC AACTCAAACA TTTAGCTCAG ATGCCAGCAG TGGCGACTAT GCCGCCAACT TCCAAGCCTT ACAAGGCGGT TTTGACACTA TGGTCATCAA AGCCCTTGAT AATGGCCAGG GCCCAAGTAG CGGTGATAAT AGTGACTTCA CTGTTACCGC TATTGAGTTT TTAGGCACAA CTACTCCACC AGCAATCGCC TTTGCTTCAG GAACAGTTAG CCCTGATTGG GGCGCAGATG GTAAAGGTTC GCTCACCTTA CAAGGTAGTG ATGAAACCAA TTTATTCACG GCAACAGGCA GTGCAATTAC TATAACCCAA ACGGCAAATA CACTGATTGG GGTCGATGCA GCTGGTCACT TGGTATTCAA ACTTGAGTTC ACCCCAGGTA CAGGTCAATG GGACTTCCAT CAATATCAAG AGATGTTACA ACCTAGCGAT GGTGATATTG ATTTCAAAGT AAGAGCCACT GATGGAGATG GCGATCATAC AGATGGTACT TTCTCTGTTA TCCCACAAGT TTATGTTGAT ACAACACCAC CTTCGGCACC TGAAGTACGC ATCATCGATG ATGTAAATGA TGACGCGTAT TTGACGAGTA CAGAGATAGG TAATAATGGC GTTCAAATAC AGGTCAAAAT TAATGCTAGT GACTTTAATA CTGGCGGCAG TGTACATCTA GAAATCGATA ATGCAGGTAA TAGCAGTACA GTAGACCTCA TTCTTGACAA TGGCGTACTG AAATTTAGTA ATGGTGCTCT AGCAACAGGT TACACCTATA CAAATGGTGT TATTACTTGG ACAGAGCCTA CTCCAACTGC AGGTCAGGCA ATCTCAGTCA CCGCCACTCA AACTGATAGT GCGAATAATG AATCAGCTGA AGGCACGGAT AATGCTACCG TTATTGATGC GACTGACGAT CGTTATACCA TCGACGAAGA TCAGCAGCTA ACGGGTAATG TTCTTACCAA TGATCAACTC GGCAATCTGA GCATCACTAG CTTCAGAGTC ATGTATAACG GTATGCAAAC CAGTTTTAAC GCCGGACAAA CCGTTACCTT GGCCGTGGGT AGCTTATTAA TACAAGCCAA TGGTGAATTC CAGTTTATTC CAAATGATAA CTGGGCAGGC GAAATGCCAA GTGTCACCTA CATAACAAAT ACTGGTTCCA CAGCAGCACT TGATATCACT GTCTTACCTA TAGCAGATAA GCCTGTAGTT AACGTTATTC TGACTGATAA TGGCATACCG CTATACAGTA ACTTTAAGAC TTCAGGAATC ACTACCGAAC AATTCCGTAC GGGCGATTTT ACTAACGCAC CATTTAATAC TGGTACGCGT ACTATTGATA ATACTTCCGG ACAAGATCAG TTGCTCGGTA CTGGAGGGAA CGATCATCTT GTCAGCGCAA ATGGCGGCGG TGATCTACTC TACGGTATGG ATGGTGATGA CATACTCGTC GGCAGTGATG CCGTTCAAGG TGACTCTCTC TATGGCGGAA CAGGAAATGA TGTTCTTGTT GCTGGTCTAG GTAATGACGG GCTCTACGGT GGTGCGGGAA CAGATATCGC CGTACTTCTT GGCAACCGAG CCGACTACAT AATAGAGAAA GGCACTGGCT ACTCTAGTAA TGATCGTTGG TTCAACTTCT TTGTAACTGA AAATGGTATC GGTGTCACTA AGGCCCTGCA TGATATTGAG TATGTGCAAT TCAAGGATGG CATATACGCG ATCAATCAAA TCACAGGTGA ACTCACATTA GAACCGCCTA CAGCTGTAGA CTATCCAATC GAAATTAATG TGTCACTTGC GGATCGAGAC GGTAGCGAAA GCATCGATAG CATTCAGCTC AGTGGTTTAC CCGAAGGCAC CTTACTCTAC AGTAGTAACG GTACATTGAT GGGAACTGCA GATGCAGACG GTAATATTCT TCTAAATCAT GGCAGCGTAT GGAACAGTGC ATCTTTAGAT GTCAATCTGA CAGGATTAAC ATTAAGGGTT CCTGGTGAAT ATGCAGGTCA AGTCAACCTC GTTGTCGAAG CAGTATCAAG AGAGTCAGGT ACAGACCTGA CCAATACTGC AACAGATGCA GATAGCGTCA TTCTTAGCTA CTTCAGTGGT CATGAAGGAG AGCCTGGCGA TCAAAATCTT AACTTTGGTA ATGAGCACAA CATTGTGGTC GGCGATTTAG ACGGTAGCGT TATTTTGCCA GGTCAAAACT ACAATATCGC CTTTATGGTC GATAGTTCTG GCAGTATTGG AAGCACGGCG CTCAATAGCA TGACAGCGCA ACTTGAACAG GTGTTTACGA CACTGAAAAA CAGCGCTACC GCTGAAGGCA GCGGCACTGT AAATGTGTTC TTGGTTGACT TTGATGGCAT TTCTAAAGGT TGGGTTTCTG TCGATATGAA AGACCCCAAT GCCCTGTCGA TACTGGAAGA TGCATTGGAC GACATGCGTT CAGGTGGAAA CACCAACTAC GAAGATGTAT TTAAAACGAC CGCCAACTGG TTCTCTGGCA TCAGCGGTAA CAGTGCCACA AATCTGGCTT ACTTTATTAC CGATGGCCAA GCTAATGAGT ACAACTACAA TGAGGGCCAA AACCCTGAGG TTTATAACCC ACGCGGAGCA AACAACAGTA TTTACCTATC CAGTATCATC CAAAACGGTT ATGTATTTGG CAATATATAT AGCCAGGATG GACGTACGAT CATCAACCAG TACGGTGAAG TATTAAAATG GACCCAAAAT AGCAATAATA GTTGGAGCTC AAGTTCAGTT GGCTTTATGC GCCCAGATGG TAATGGAGGT TTCCAATTTG CCAACTTGGG TACAAACGGC ACCGGAACGA ATGCGAATTC CCAGCAAGGA TTTGCTTTCC TATCAACGCT AGGAGTGATT GTTCAGGCCA TTGGGATAGG CCCATCACTG GATAGTGAAG ATCTTAAGCC ATTTGACTCT GACGGTAATG TTCTGACTAA CATCAACGCT GAGGATTTAG CCGATGCGAT CATTGGTACT CCAATTACCC AACTGCCAGG ATCTGATACC ATCAACGGTG GTAACGGCGA CGATATACTC TTTGGTGATG CCATCAACTT TAACGGTATC AGTGGCCAAG GTTATGTTGC CATCAAAGAT TATGTTGCTG ATCAGCTAGG GATAGCTGCA GTAACCGATG CCCAAGTACA TAGATATATT ACTGAGCATG CATCTGATTT TGACCAATCT GGTGCCAGCG ATAAGGCAGA TGTTCTTATC GGCGGACAAG GTAATGACAT ACTTTATGGG CAAGGTGGGA ATGATCAGCT TTACGGCGGT AATGGTAATG ATCTTATATT TGGTGGTGCT GGTAACGATA CTATTATTGG GGGCCTAGGA AACGATAAAC TAACGGGTGG GACTGGTGCT GATACTTTCG TCTGGCAGGC TGGCGAGTCA GGAACAGACC ATATCACTGA CTTTAATATC CATGAAGATA AATTGGATTT ACGCGATCTA CTTCAAGGTG AAAATACCAA CACGCTAGAC AGCTATTTGA ATTTCAGCCT TAACAGTAGT GGCTCTACAG TGATCGATAT TGATGCCAAT CAAGACGGTG TCTTTGAACA ACATATCATC CTTGATGGTG TTAATTTGTT CGACGAATAT GGCAGCACTA ACGATGCTGG TATAATTAAT GGCTTACTGG GTAGTAATAA TGATGGTCCG CTAATCATTG ACTCTCAGCC TGTCACACCA GAACCTGTAC AAGGAATCGC ACCACTGGAT ACTAATCCAC ACCATAATAT TATTCCTTAA
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Protein sequence | MGSVITSKKG LLKLVKGQIN VEVDGSNQPA KDGEQLPKGA VLHIDENATY EITFDDGTKL SNEVVPNETA TVATNTTDGA ALAEIQALQD LIASGEDPTQ NLPETAAGNT PGRDGNSGYV TLARSGSEVL ATSGYSTTGQ ALTATSANTP AQTLAIDSPS VVVNDSNTID EDTVATGNVL DNDSDVDSIL SVVSFEVDGT TYAAGTEVTL EGGTLVINTD GSYTFTPNEN WNGQVPVITY TTNTGSSATL TINVTAINDV PVIAGDDVGA VMEDATDPIL TDSGTLTITD ADSGQAVFQA GSGTPSVGAL GSLTIDATGN WTYNVDNADV QYLAEGETKV ETFVVLSADG TEHTVTITIT GTNDVPVIAG DDVGAVMEDA TDPVLTDSGT LTITDADSGQ AVFQAGSGTP SVGALGSLTI DATGNWTYNV DNADVQYLAE GETKVETFVV LSADGTEHTV TITITGTNDV PVIAGDDVGA VMEDATDPIL TDSGTLTITD ADSGQAVFQA GRGTPSVGAL GSLTIDAAGN WTYNVDNADV QYLAEGETKV ETFVVLSADG TEHTVTITIT GTNDVPVIAG DDVGAVMEDA TDPILTDSGT LTITDADSGQ AVFQAGSGTP SVGALGSLTI DAAGNWTYNV DNADVQYLAE GETKVETFVV LSADGTEHTV TITITGTNDV PVIGTTTSAI VSEEGLTPLG LPDTTGNTDT TNSPTATGTI NIQDVDSDSL TVSLSGPTGL LSGGQAIQWS WDPVTQTLTG YIGTAGEASY TEIMTATLTP PVTGSSGNWT YDVTLKGPVD HPDTETEDTL SVNIGINVND GHGGTSTGSF NVTIEDDAPV ISPIAAVQTT TTSIPDSLVG SFSLTGYSGN NNSLDFNGFT ISARGFTSST NSNLIDAAIF GSGSGIDVSS AGAPYHNLAN EVDFRKFADG SSASEEIIIT LDPGTIAYGV NIQFSHMFGG ELEVGVVEFW RDGQLIATQT FSSDASSGDY AANFQALQGG FDTMVIKALD NGQGPSSGDN SDFTVTAIEF LGTTTPPAIA FASGTVSPDW GADGKGSLTL QGSDETNLFT ATGSAITITQ TANTLIGVDA AGHLVFKLEF TPGTGQWDFH QYQEMLQPSD GDIDFKVRAT DGDGDHTDGT FSVIPQVYVD TTPPSAPEVR IIDDVNDDAY LTSTEIGNNG VQIQVKINAS DFNTGGSVHL EIDNAGNSST VDLILDNGVL KFSNGALATG YTYTNGVITW TEPTPTAGQA ISVTATQTDS ANNESAEGTD NATVIDATDD RYTIDEDQQL TGNVLTNDQL GNLSITSFRV MYNGMQTSFN AGQTVTLAVG SLLIQANGEF QFIPNDNWAG EMPSVTYITN TGSTAALDIT VLPIADKPVV NVILTDNGIP LYSNFKTSGI TTEQFRTGDF TNAPFNTGTR TIDNTSGQDQ LLGTGGNDHL VSANGGGDLL YGMDGDDILV GSDAVQGDSL YGGTGNDVLV AGLGNDGLYG GAGTDIAVLL GNRADYIIEK GTGYSSNDRW FNFFVTENGI GVTKALHDIE YVQFKDGIYA INQITGELTL EPPTAVDYPI EINVSLADRD GSESIDSIQL SGLPEGTLLY SSNGTLMGTA DADGNILLNH GSVWNSASLD VNLTGLTLRV PGEYAGQVNL VVEAVSRESG TDLTNTATDA DSVILSYFSG HEGEPGDQNL NFGNEHNIVV GDLDGSVILP GQNYNIAFMV DSSGSIGSTA LNSMTAQLEQ VFTTLKNSAT AEGSGTVNVF LVDFDGISKG WVSVDMKDPN ALSILEDALD DMRSGGNTNY EDVFKTTANW FSGISGNSAT NLAYFITDGQ ANEYNYNEGQ NPEVYNPRGA NNSIYLSSII QNGYVFGNIY SQDGRTIINQ YGEVLKWTQN SNNSWSSSSV GFMRPDGNGG FQFANLGTNG TGTNANSQQG FAFLSTLGVI VQAIGIGPSL DSEDLKPFDS DGNVLTNINA EDLADAIIGT PITQLPGSDT INGGNGDDIL FGDAINFNGI SGQGYVAIKD YVADQLGIAA VTDAQVHRYI TEHASDFDQS GASDKADVLI GGQGNDILYG QGGNDQLYGG NGNDLIFGGA GNDTIIGGLG NDKLTGGTGA DTFVWQAGES GTDHITDFNI HEDKLDLRDL LQGENTNTLD SYLNFSLNSS GSTVIDIDAN QDGVFEQHII LDGVNLFDEY GSTNDAGIIN GLLGSNNDGP LIIDSQPVTP EPVQGIAPLD TNPHHNIIP
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