| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3826 |
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| Symbol | |
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| ID | 4845868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4499029 |
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| End bp | 4499559 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640121090 |
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| Product | MSHA pilin protein MshD |
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| Protein accession | YP_001052166 |
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| Protein GI | 126176017 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0028608 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACTA ATGCTCTCTT TAAAGGACAT ATTCAAGCCC GTCAATTAGG TTTTACCCTT
ATCGAATTAG TCATTGGTAT GTTGGTGATT GGCATTGCGA TAGTGATGCT AACCAGCATG
TTATTTCCCC AAGCAGATCG TGCGGCCAGC ACCTTACATA GAGTACGCAG TGCTGAGCTT
GCCCATTCGG TGATGAATGA AATATGGGGC AAGCGTTATG ATCAAAACAC TAATGCCAAT
GGTGGAACGC CGGCCTGTGA TAGTCCGCTA GGAAGCAATT GTTCCACTTC CTTGGGTCCA
GAGGTGGGTG AGAGTCGTAA CAGCTTTAAT GATGTGGACG ATTACAACGG CTTAAATGAA
ACAGCGACTA TGCTCAACTC AACCCAAACC TATGCCGCTG CTTATCCTAA CTATCAATTA
AGTGTCACTG TCGCCTATGG GCCTGCGCCC AATACTAAGC TAGTGACCAT TAATGTGACG
ACGCCGGACA ATGAAGTGAT CACTTACAAT CTGGTAAGGA GCAATTACTA A
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| Protein sequence | MPTNALFKGH IQARQLGFTL IELVIGMLVI GIAIVMLTSM LFPQADRAAS TLHRVRSAEL
AHSVMNEIWG KRYDQNTNAN GGTPACDSPL GSNCSTSLGP EVGESRNSFN DVDDYNGLNE
TATMLNSTQT YAAAYPNYQL SVTVAYGPAP NTKLVTINVT TPDNEVITYN LVRSNY
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