| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3825 |
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| Symbol | |
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| ID | 4845867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4498181 |
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| End bp | 4499029 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640121089 |
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| Product | MSHA biogenesis protein MshO |
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| Protein accession | YP_001052165 |
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| Protein GI | 126176016 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0143391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTCTT TTTCAGCAAA GCGTATGCAA ACATCCAAGC GGGGTTTTAC CTTAGTCGAG
ATGGTCACAG TTATCTTGAT TCTGGGGATT CTTGTGGTCG GGGTGAGTAG TTTTATTATT
TTTGGTACGC GGATTTTTGT GGAGTCGAGT TCAGTCGATC AAGTACTAAG CCAGAGCCGT
TTTGCCGTTG AGCGAATGAC CCGTGAGCTG CGTAGTGCTT TGCCTAATAG TGTGCGAGTT
AATACCGATT CGCTGACCTA TCAATGTATC GAGTTTGTGC CTATCGAAGC CAGCACGACT
TATCTCACTA TGCCAATCAT CCCCGATGCT GCCGCGAGTA CTGGGATAGT TATTCTAGAT
AATACTGCGA GTGCGATTCG CGTAAATCAA TTCGCTTGGA TCTATCCCTT GGTTGATGCC
GATGTGTATA GCAGTGCGAG ACAAAAACGG GCACAGGTTA AAACGATTGC TATCTCGGGT
AATCAAGTGA CACTGACTTT TACTGCGCCA ACACGTTTTG CCGAAGCATC ACCACGACAA
AGGATCTATT TGGGGTCGAG TCCTGTGAGC TATTGCTTTG AAAAGGGGAC AAGCGGTAAT
GATTTGCAAA TAGTGCGTTA TGCTGGTTAT AACTTTAATG GTGTTCAGCC AAATCCTGCC
ACTATGGGCA CGGGCGTGCT AATGGCGCAA GGTGTGGCGA ATCGTCTCGA TAATAGTAAT
GACTTGCCGT TGATCTTAAC GCCATCGAGT CTAGTCAATA ATGCTATGGT GCACTTGCAG
CCAAGATTTA ATGTTAATGG TGAGACGTTC CAATATCGAC ATCAAGTGCA GGTGATCAAT
GTTCCTTAA
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| Protein sequence | MGSFSAKRMQ TSKRGFTLVE MVTVILILGI LVVGVSSFII FGTRIFVESS SVDQVLSQSR
FAVERMTREL RSALPNSVRV NTDSLTYQCI EFVPIEASTT YLTMPIIPDA AASTGIVILD
NTASAIRVNQ FAWIYPLVDA DVYSSARQKR AQVKTIAISG NQVTLTFTAP TRFAEASPRQ
RIYLGSSPVS YCFEKGTSGN DLQIVRYAGY NFNGVQPNPA TMGTGVLMAQ GVANRLDNSN
DLPLILTPSS LVNNAMVHLQ PRFNVNGETF QYRHQVQVIN VP
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