| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3378 |
|---|
| Symbol | |
|---|
| ID | 4842217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3953538 |
|---|
| End bp | 3954518 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640120643 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_001051724 |
|---|
| Protein GI | 126175575 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGC AAGACAAGCA AGCCGTAGCA GAAACAAGCC AGATGAGTGT TCAGAAAGTA
CAACCGATAC CGCAGGAAGC CTTTGACTGG TATGACGAAT ATGCCCACGG CATTATCGAC
CGCCGTGAGT TTATGGGGCG GCTCGCAGGA CTGGTGGCGC TAGGGTTTAC CATGACAACG
CTCACGGGCG CACTCATGCC GAACTATGCC CTTGCCGAAC AAGTGTCGTT TAACGACCCG
AGTATTCAAG CCAGCTATGT TAAATTTTCC TCGCCCAATG GTTACGGTGA AGGGCGCGGC
TATTTAGTGA TACCCAATGA GTTATTACTC GCGGGCAGTG CCGCTGGTGA GCCCAAGACT
TTAGATCCCA GTAAAAAAGC TGCTGTGATA TTAGTGGTGC ACGAGAACCG TGGCCTAAAT
CCCTATATCG AAGATGTTGC TCGCCGATTA GCGGCGCAGG GGTATATCAC CTTCGCCCCC
GATGCACTTT ATTCCCTCGG TGGTTATCCG GGCAATGATG ATGCGGGCCG CGCCATGCAA
AGCAGTTTAG ACAGAGCCAA AATTGAACAA GACTTTATTG CCGCCGCGCA GTTTTTAAAA
TCCCATCCTC AGAGCAATGG CAAACTCGGT GCCGTAGGTT TTTGCTTTGG CGGCTATATT
GTCAATATGC TGGCCGCCAC GATTCCCGAT GAGCTCAATG CTGGCGTACC TTTCTATGGC
ACGCCTGCCG CTGCAGAGCT GCGTAGCCGC GTGAAAGGGC CGTTAATGTT GCAGTTTGCT
GGGCTCGATC AGCGGGTGAA CGACACTTGG GCCGAGTATG AAACCCAGCT AAAAACCAAT
AAAGCCGATT ATGTCGCCTA TCTTTACCCG AATGTGAATC ACGGTTTCCA TAACGACTCA
ACAGGACGAT ACGATAAAGC TACCGCCGAG CTCGCATGGG CGCGCAGCTT AGCCTTCTTC
GATACTCGAC TGCGTGGTTA G
|
|---|
| Protein sequence | MTQQDKQAVA ETSQMSVQKV QPIPQEAFDW YDEYAHGIID RREFMGRLAG LVALGFTMTT
LTGALMPNYA LAEQVSFNDP SIQASYVKFS SPNGYGEGRG YLVIPNELLL AGSAAGEPKT
LDPSKKAAVI LVVHENRGLN PYIEDVARRL AAQGYITFAP DALYSLGGYP GNDDAGRAMQ
SSLDRAKIEQ DFIAAAQFLK SHPQSNGKLG AVGFCFGGYI VNMLAATIPD ELNAGVPFYG
TPAAAELRSR VKGPLMLQFA GLDQRVNDTW AEYETQLKTN KADYVAYLYP NVNHGFHNDS
TGRYDKATAE LAWARSLAFF DTRLRG
|
|---|
| |