Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3254 |
Symbol | |
ID | 4844464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 3814866 |
End bp | 3815378 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640120514 |
Product | lysozyme |
Protein accession | YP_001051603 |
Protein GI | 126175454 |
COG category | [S] Function unknown |
COG ID | [COG3656] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0163172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCATC TTATTCGTAC CATTGCGGCG AGTGCTTTGT TTGTGAGTTC TGCTGCATTT GCGGCGCCGC AAATGACTGT CGATTTAACC TTGTCGGAAA TTACCGAAGG CCAATACCAC AGACCCTATG TGGCCGTGTG GGTTGAAAAT ACCCAAGGGC AACCGGTAAA AACCTTAAGC CTTTGGGTTT GGGATGAAGG CCATAAATGG CTTAAAGACA TCCGTCGTTG GTGGCGTAAA GCGGGTCGTG ACGATATGAG TTTTGTTGAT GGTATTGCAT CTGCCACACG TCCTGCGGGT CATTACAAAA TCGATTGGGA TTTAAAAGAT GAGTTAGGCA AAGCACTCGA GCCTGCTCGT TACACTGTGT TTATTGAAGT GGTGCGTGAG CATGGGGGAC GCGATCTCGT GCGACAAAAC ATCGATTTAG CTGCGGGGGA CTTCTCAGTG CAGTTACCCG CCACCACTGA AACCGGCGTT ATCGACATAC GCTTAAGTGG CATGGCTCGC TGA
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Protein sequence | MRHLIRTIAA SALFVSSAAF AAPQMTVDLT LSEITEGQYH RPYVAVWVEN TQGQPVKTLS LWVWDEGHKW LKDIRRWWRK AGRDDMSFVD GIASATRPAG HYKIDWDLKD ELGKALEPAR YTVFIEVVRE HGGRDLVRQN IDLAAGDFSV QLPATTETGV IDIRLSGMAR
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