| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1974 |
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| Symbol | |
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| ID | 4844284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2288638 |
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| End bp | 2289288 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640119194 |
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| Product | type III secretion system protein |
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| Protein accession | YP_001050347 |
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| Protein GI | 126174198 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTAC TCGACCACCC AGTCCAATTG ATCATTATGT TGTTTTGCCT GTCACTGCTG
CCGCTGTTTG CTGTGATGGG CACCTCATTC TTGAAATTGG CAATCGTGTT CTCTATGTTA
CGTAACGCTC TAGGGATCCA GCAGATCCCA CCCAATATGG CAATTTACGG CCTCGCATTA
ATCCTCACCC TATTCACCAT GGCACCTGTG GGGATGGCAA TCAATGACAA TCTCAAAGCC
ACTCCCATAG TGTTCGATGC GCCCAATGTT TTTGAGCAAA TCAACACTGA AGCTATCGCT
CCTTACCGCG CGTTTCTCGA CAAAAACACC AGCAACACTC AGATTGAATT CTTCGCCAAT
ATAGGCCACA AGGTCTGGCC CGAAAAATAC CAGCAAGTGC TGACCAAAGA CTCACTGTTA
GTCATGGTGC CAGCCTTCAC TATGAGTCAG CTCATAGAGG CATTTAAGAT AGGTTTACTC
ATCTATCTTC CCTTTGTTGC AATTGATCTT ATCGTCTCCA ATATTTTACT GGCAATGGGC
ATGATGATGG TCTCGCCCAT GACTATAGCG CTACCTTTCA AGTTGTTGAT TTTTATCTTG
ATGGGTGGAT GGGAAAAACT GATCAGCCAA CTAATGATGT CATTCTCATG A
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| Protein sequence | MTLLDHPVQL IIMLFCLSLL PLFAVMGTSF LKLAIVFSML RNALGIQQIP PNMAIYGLAL
ILTLFTMAPV GMAINDNLKA TPIVFDAPNV FEQINTEAIA PYRAFLDKNT SNTQIEFFAN
IGHKVWPEKY QQVLTKDSLL VMVPAFTMSQ LIEAFKIGLL IYLPFVAIDL IVSNILLAMG
MMMVSPMTIA LPFKLLIFIL MGGWEKLISQ LMMSFS
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