| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1794 |
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| Symbol | |
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| ID | 4843535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2088181 |
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| End bp | 2089431 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640119016 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001050170 |
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| Protein GI | 126174021 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAC AAGGAAGTAA TGTTTTTTAT TTATTTTCAT CTAACTCTAA AAAAAGAAGA
GTTTCTGTAT TATTTTATTT AAAACCTTGT AGAGTATTAT CGTTTTTTAT TTTATTAAGT
CTTGTCTCTG GGTGTGTTTC ACATTCTTCA GTCGATGAGT TGCTCCCACG TAAGCCTTTA
GTCCTACCTG CATCACATCG CGCATTATTC AATACTCAGA CTATTCCTGT TCCGTCAGTT
GATAGCTTAT CAAGTCTTAC AAGTGAACAG CGCACTGAAT TAAATGATTT CATAAGAAGA
AAAGAGATTG AAAAACTTTC ACCCAGAAAA CAAGTTTTTG AATTCATCAG TAGTAAAATG
CAACACTTTA ACTACGAGGG TAGAAATTAT ATCGCATCAG AAGCATTGAG AACCCAGAGT
GGAAATTGTA TGAGTCTAGC TTTGTTGACT TATGCTGTTG CTAATATATT GAATGTAGAA
ACCACTTTTC AAGTAATTCA CTCTTCTCCA TTACTTACTG ATATTAAAGA TGATTTGGTT
GTTAGCTCGG ATCATGTTCG CGTTTTTCTA TCTGATAGTG CATATAAGGG TCACTATCTA
AGTGGTGGAA ATTATACTGT TATTGATTAT TTTCCAGACG TGAATGATCG AGCTGGCGCT
ATTGTTAGTG AGCAGGAGTT TCTTGCGATG TTTTATCGTA ATCTTGCAGC AGATGCTTTG
CTGGAAGGTG ACTTAAGTCG AAGTTTCGCA ATGCTTGAAA GAGGGGTTTT ATTAGCGCCT
AAGTACTCAC CTGTTATAAA TATGATGGCA ATATTACACC GTCGTGCAGG CGATTATGAC
ACTTCTCGGG ATTTTTATAA ATATGGGCTT GAAATCGCTG ATAGCCAAGT TGTGTTACTT
AGTAATTATC GACAACTTTT AAGACAGGTT GATGATAAAA AAGAGCTAAA TTCAGTCGAG
GCACAACTAC TTGCTCTTAA TGACTCAACA CCTTATGAAT GGTACGGTTT AGGGCTCGAT
GCATTAAAAT CTGCGGACTA TAAAAAAGCA CAAGTCTATT TAAAAAAATT TTTAAATAAT
ACGCCTTACT TCCATAGAGC TTACTATGAT CTTGCTAAAG CCCAGTTTGC CTTGGGAGAT
ATACGCTCAG CACAAGAGTC TTTGCATCAA GCGTTAGAGT TAGCAAAATT ACCTGATAAC
CTACAAAAGT ATAAAGCAAA ATTGCAATGG TTAAGTCAAC AGAATCATTA A
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| Protein sequence | MTKQGSNVFY LFSSNSKKRR VSVLFYLKPC RVLSFFILLS LVSGCVSHSS VDELLPRKPL
VLPASHRALF NTQTIPVPSV DSLSSLTSEQ RTELNDFIRR KEIEKLSPRK QVFEFISSKM
QHFNYEGRNY IASEALRTQS GNCMSLALLT YAVANILNVE TTFQVIHSSP LLTDIKDDLV
VSSDHVRVFL SDSAYKGHYL SGGNYTVIDY FPDVNDRAGA IVSEQEFLAM FYRNLAADAL
LEGDLSRSFA MLERGVLLAP KYSPVINMMA ILHRRAGDYD TSRDFYKYGL EIADSQVVLL
SNYRQLLRQV DDKKELNSVE AQLLALNDST PYEWYGLGLD ALKSADYKKA QVYLKKFLNN
TPYFHRAYYD LAKAQFALGD IRSAQESLHQ ALELAKLPDN LQKYKAKLQW LSQQNH
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