| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1632 |
|---|
| Symbol | |
|---|
| ID | 4841759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1906515 |
|---|
| End bp | 1909304 |
|---|
| Gene Length | 2790 bp |
|---|
| Protein Length | 929 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640118852 |
|---|
| Product | TonB-dependent receptor, plug |
|---|
| Protein accession | YP_001050015 |
|---|
| Protein GI | 126173866 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000717844 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAATA GAAAATTTCT ATCTAATTCA ATAAGTTTAG CCTTGGTTGG CGGTGCGGTG
CTGACATCGT TAGGAGCCTC ATTTGCTAGC GCAGAAGAAG CAGTTGATTC AGTCGAACGG
ATTCAGGTAA CCGGTTCAAG AATCCAGCGT ACAAATGTCG TTACTTCAAG TCCTGTGATG
ACATTAAGCG CAGCAGATAT TAAAGCGAGT GGTGTTACAC GTATTGAAGA TCTGTTGAAT
GATATGCCTC AAGTGTTCGC AGCACAAAAC TCTACTGTTT CAAATGGTTC CAGTGGCACC
GCAACCGTTG ACTTAAGAGG ATTAGGATCA CAGCGAACAT TGGTTCTCGT CAACGGACGC
CGATTACCTG CAGGAAGTAT TCTGGGTAGC ACTACTGCGG ATTTAAATAC AATTCCTGCA
AATATGGTTG AAAGGGTTGA AGTCTTAACG GGTGGTTCAT CTGCTACTTA TGGTTCTGAT
GCTATCGGTG GCGTTGTAAA CTTTATTTTG AAAAAAGATT TTGAAGGATT CCAATTTGAT
TATCAATACA GTCTTTATCA ACACGACAAT AGCGATAAAG GTGTGCAAAA TATCACCACA
GCATCTGGTT TCGATGCACC TAATGGTAAT GTAACTGACG GTAATGCAAA CGATTTCTCT
ATCATGATGG GAACTAATTT CTCTGGTGAT AAAGGAAATA TTACAGCCTA TGCAACCGTT
CGTGATATCG ATGCCGTTGT TCAATCCGAC CGTGATTATA GTGCTTGCGC ATTAACTGAT
GATGGTGCTG GAGGAATGGA ATGTGGTGGC TCTAGTACAA TACCTACTGG TCGTTTTACT
GATTTCGCTG ATTTTGATTA TACCGTTGCT GGTAATCAGT TTATTCCACG TGATGGCCTT
TTGTATAATT ATGGACCTAC AAACTACTTC CAAAGACCAG ATAATCGTAG AACTTTTGGT
GTGATAGGTA ACTATAGTCT CAATGATAAT GTTGAGATCT ATACAGAACT CAGCATGATG
GACGACAGAA CCGTTGCGCA AATTGCACCA TCAGGAAACT TTTTCACAAC TTCAACTCTT
GGCTGTGGTA ATCCACTTCT TTCTGATCAG CAATTTGATG CAATTTGTGG ACAATATGGT
TTGACAAAAG ACGATACCCG AGAGCTTTAT ATTGGACGTC GTAATATTGA AGGTGGTCCA
CGTCAAGACG ATCTCCGTCA TACCATGTAC CGTGGCGTAC TTGGTATAAG AGGGGAAATT
AATGATGATT GGACTTATGA TGTTTACGGT AACTATGGAA CTACTGCATA TATCCAAACT
TATCGTAATG ATATGTCGAA TGCACGTATT GCAAGAAGTT TAGATGTTGT AACAGATCCA
GATACAGGCA GTGCTGTATG TCAATCAGTT CTGGATGGAT CAGATGCTAG CTGTGTACCA
TGGAATATTT TTGAAGCTGG CGGAGTAACA CAAGAAGCAT TGGATTATTT AATATTACCT
TTATATGCGA GAGGCGATAC TGAATCACTA CAATTAAATG GCTTCGTTAG TGGTGACTTA
ACTGACAATG GTTGGGTGTT ACCGACAGCA ACAACGGGTC TTGGTGTCGT ATTCGGTATT
GAGCATCGTG AAGAGTCAAT GACTTTTGAG CCGGATAGTG GTTTTCAATC AGGTGATGGA
GCTGGGCAAG GTGGTGCTAC AACAGGTTTA GATGGTAGTT ATACAGTAAA TGATTTATAT
GCAGAGCTTG AATTACCTTT ATTAGAAGAT AAATTTTTAG CTCAAGATTT AGTACTTGAA
GCAGCATATC GATATTCTGA TTATTCAACA GACAATACTA CAGATACCTA TAAAGTAGGT
GTTAACTGGG CACTGAATGA TAATGTGCGT ATTCGTACAA GTTTGCAGCA TGCGGTGAGA
GCACCAAACA TTGGTGAATT ATATGCGTCG CAGTCGCTAC AGTTATTCAA CTGGGATGTG
GATCCATGTT CAACTAGTAG CCCTCAATAT TCGTTTGAAG AATGTGCTCG AACAGGTGTT
ACTAATGGTC AATATGGAAA TATCCCTGAC AGCCCAGCAG GTCAATACAA TGAGCTAGGT
GGTGGTAGTC AAGAGCTCAC TCCTGAGAAA TCAGATACTA TATCTGTCGG TGTGGTGCTA
ACTCCTACAT TCATCGAGAA TTTCTCAGTA ACGTTTGATT TCTACGATAT TACGATTGAT
GACGCAATTG ATACCATTTC ATCCGCTGAA GTGGTTCGTC TTTGTGCAAA AGATATTAAT
CCTAGCATGT GTAACCTTAT TCACCGTAGC TCATCAAATG GCGATTTATG GGTGGGAAGT
AATGCTAACA GTGGTTATGT TGAGGCGACT AATATCAATA CAGGGAGTTT TAGTACTCGA
GGTTTAGATA TAGACTCTGC CTATAATTTA GAAACTAGTT TAGGTGATAT CCACTTTAAT
TTAGTAGCAA CATATTTAGA AAGTTTAGAA TATGAAGCAT ATGCTGGTGC AGCTCCGTAT
GATTGTGCTG GGCAGTGGAA TCGCGATACC TGTGGTCAGC CTGCACCAAA ATGGAGACAT
ATCTTCACTA CAACTTGGAA CACTCCTTGG GACCTTGATT TGACTGCACG CTGGAGATAT
TTTGGTTCTG CAGATGAGTT AAGTGAAGCC GATGATTTAA CAACTTTGGA TACTGTTAAT
TATTTTGATG TTGTTGGAAA TTGGCAGGTT CTTGGTAATA CTAAACTACA GTTTGGTGTC
AACAATTTAT TTGATAAAGA TCCCAAATAG
|
|---|
| Protein sequence | MRNRKFLSNS ISLALVGGAV LTSLGASFAS AEEAVDSVER IQVTGSRIQR TNVVTSSPVM
TLSAADIKAS GVTRIEDLLN DMPQVFAAQN STVSNGSSGT ATVDLRGLGS QRTLVLVNGR
RLPAGSILGS TTADLNTIPA NMVERVEVLT GGSSATYGSD AIGGVVNFIL KKDFEGFQFD
YQYSLYQHDN SDKGVQNITT ASGFDAPNGN VTDGNANDFS IMMGTNFSGD KGNITAYATV
RDIDAVVQSD RDYSACALTD DGAGGMECGG SSTIPTGRFT DFADFDYTVA GNQFIPRDGL
LYNYGPTNYF QRPDNRRTFG VIGNYSLNDN VEIYTELSMM DDRTVAQIAP SGNFFTTSTL
GCGNPLLSDQ QFDAICGQYG LTKDDTRELY IGRRNIEGGP RQDDLRHTMY RGVLGIRGEI
NDDWTYDVYG NYGTTAYIQT YRNDMSNARI ARSLDVVTDP DTGSAVCQSV LDGSDASCVP
WNIFEAGGVT QEALDYLILP LYARGDTESL QLNGFVSGDL TDNGWVLPTA TTGLGVVFGI
EHREESMTFE PDSGFQSGDG AGQGGATTGL DGSYTVNDLY AELELPLLED KFLAQDLVLE
AAYRYSDYST DNTTDTYKVG VNWALNDNVR IRTSLQHAVR APNIGELYAS QSLQLFNWDV
DPCSTSSPQY SFEECARTGV TNGQYGNIPD SPAGQYNELG GGSQELTPEK SDTISVGVVL
TPTFIENFSV TFDFYDITID DAIDTISSAE VVRLCAKDIN PSMCNLIHRS SSNGDLWVGS
NANSGYVEAT NINTGSFSTR GLDIDSAYNL ETSLGDIHFN LVATYLESLE YEAYAGAAPY
DCAGQWNRDT CGQPAPKWRH IFTTTWNTPW DLDLTARWRY FGSADELSEA DDLTTLDTVN
YFDVVGNWQV LGNTKLQFGV NNLFDKDPK
|
|---|
| |