| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2456 |
|---|
| Symbol | |
|---|
| ID | 4846091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 2432386 |
|---|
| End bp | 2434065 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640117166 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001048359 |
|---|
| Protein GI | 126180394 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAG ACCAACAATG GCAGCCGGTG CCGGGCACCG CCGGTGCCGA GATCTACCCC
TTCCTCCGAA AACCGGACGT CACCTGTTCG AACGCCTACC TTATCCGGAC ACCCGGCGAG
ATCCTGCTCA TCGATACCGG GGCCGACGCC GGACAGATGG AGCGGATCCT CGAACTGGTG
GGCGACCTTC TTTTGGAGGC ACCTCGTCCG ATTCTCCTCT TCCTCACCCA CTGCCACGCC
GACCACTGTT TCCAGGCCAT CCGGAACCCC CGGTTCCGGG CCCTCCCGGA TCTCAGCATT
GCCGCAGAGG AGACGGGCGC CCGGTCTCTC GAGGCCGGCG ACGCCGTCCG GACGGTTGCG
GAACTGATGG GGTGGGAGAT CGAGCCGCTC CCGGTCGCCC TGCCCCTTCT TGCCGCCCGC
GACCGCGAGA CCCTGGAGAC GGACGACGGT TTCGTCCTCC ATCGCCAGCA GATACCGCTC
CGTTCCGGAG ATATCCTTAC GGTCTACCAC ACCCCCGGGC ACACGCCCGA CAGCATCTGC
ATCCGGCTTG GTGAATACCT CTTTATAGGT GACCTCCTCT TCTCCGCGAG CCCCGGGATC
GCCGGGCTTG CCGGCTGGGA TCAGCCGGCG CTGCTCGAGA CCGCAGGAAG GGTCCGGTGG
ATATTTGCTC ACGAACCGGT GAGCCTCTGC TGTCCGGGCC ACGGCAGGGA TCTCCTGGCT
ACGGCGATGC CGGCACTCCT CGACCGGCTC GAGAGAGATG TTGCGGAGCT CGCCAGCATA
GGCCCCTTCG ACCGAAGCCG GCTCGACGAC TCCCTGGAGC ACGCCGTCGA CCTGCTCCAG
GAGGCCAACC GGGTCTTTGC GGCGGTTTCA GGGCGGCTTT ATGCCCTCGC CTACCGCCTC
GACGATCTCG GTGAGGACGA AGAGGCCCGG CGCTACCAGG AACTTCTGGA GTCCGACCGG
ATTGACGGGG TTCTCGAAGA TTTTTCACGG TTTGCCGACG AGTTCAACGC CGGAAGGAGG
CTTGAGGTCC AGCTCGTTCT CAAAGCCGTT CAGGCGATCC AGCGGATCGA GACTCACTTT
GCAGGCGATC GGCTGAACCA CGTCGTCGAC GCAGCGCTCC TCCGCCGGGC CGACCGCTTG
CTCACCGACT TCATGAACAC GGTCTTCGGC TACCGGGACG CCGGCTGCCT CTCCACCGTG
GACGCCCCGT CGATGCTCCG CGATCTCGTC GCCGGCGTCT CGACACCTCC GTTCTCGGAC
GAGGCGTTCA TCGAGGCGGC GGACGACCCG GTGGCGTACC GGGTGGAGCT CGTCTCTCGC
CTCGCCTACC TCCCGCTCCT GGAGGACGCC GACCTCGTTG TGGACGCCGA CCTCGTTGTG
GACGCCGACC TCGTTGTGGA CGCCGAAGGA TCTTTCCCGC CGGTGCTGGT CGACCGGGAA
CGATTCTGCG ACGAGGTCGT CGGCGTCCTC GAGGATATGG CGGCCGCCGG CGCCCGGGAG
ATCCGGCTCG CCCTCCGGCG GGAGGGGGCG GCCGCCGGGC TCCTGATCGA GGGCTCTGCC
CTCCTGTCTC CCCGGAAACT CCGGTTCTAC CGGCGGAAGT TCGGGCTCTC GGGAGCGACG
CTTGCGATCT CCGGGAACGG CGCCGGCCTG TTCCTGCTCT TCAAGCCCGC TTCCTCCTGA
|
|---|
| Protein sequence | MLEDQQWQPV PGTAGAEIYP FLRKPDVTCS NAYLIRTPGE ILLIDTGADA GQMERILELV
GDLLLEAPRP ILLFLTHCHA DHCFQAIRNP RFRALPDLSI AAEETGARSL EAGDAVRTVA
ELMGWEIEPL PVALPLLAAR DRETLETDDG FVLHRQQIPL RSGDILTVYH TPGHTPDSIC
IRLGEYLFIG DLLFSASPGI AGLAGWDQPA LLETAGRVRW IFAHEPVSLC CPGHGRDLLA
TAMPALLDRL ERDVAELASI GPFDRSRLDD SLEHAVDLLQ EANRVFAAVS GRLYALAYRL
DDLGEDEEAR RYQELLESDR IDGVLEDFSR FADEFNAGRR LEVQLVLKAV QAIQRIETHF
AGDRLNHVVD AALLRRADRL LTDFMNTVFG YRDAGCLSTV DAPSMLRDLV AGVSTPPFSD
EAFIEAADDP VAYRVELVSR LAYLPLLEDA DLVVDADLVV DADLVVDAEG SFPPVLVDRE
RFCDEVVGVL EDMAAAGARE IRLALRREGA AAGLLIEGSA LLSPRKLRFY RRKFGLSGAT
LAISGNGAGL FLLFKPASS
|
|---|
| |