Gene Memar_2422 details

Gene Information

• Locus tag: Memar_2422
• ID: 4846228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 2402672
• End bp: 2404675
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640117130
• Product: hypothetical protein
• Protein accession: YP_001048325
• Protein GI: 126180360
• COG category: [S] Function unknown
• COG ID: [COG5427] Uncharacterized membrane protein
• TIGRFAM ID: [TIGR03662] Chlor_Arch_YYY domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAACTCA TCCTGCAGGC GTACGACGTG CTCCTCTGGG CCGCCCTCCT CAAAGGCCTC 
CAGCTCGCCC TCTGGCCCCG GCTCCGCCCG GCACTCGGGG ACCATGCCTA CCCGGCGGCC 
TACCCGGCCT CCCTCCTCCT CTTCGCCCTC GCGACCTGGT ACTGCGGCCT CCTCCGCGTC 
CCGGTCGCCC TCGCCCTCCT CCTCTTCGTT GGTCTCGCCG TATACGGCAT CCAGCGGGGC 
GATTACCGGT TAGGGGAGCT TCGGAGCCTC CTTTTCTGGG ACGCGGTCTT CCTTGTCGGC 
TTTTTATTTG CGCTTGCGGT CCGGTTCGTA AACCCGCCCA TCGGCTACTT CAGCGAGCAG 
TACATGAACC ACGCCTTCCT CGCGAGCGTC ATCCGGGAGC CCGTGGTGCC GCCGCTCGAT 
CCCTGGTTTG CAGGCGGGCA CCTTACGGTC TACTACTACC TCGGGCACTG GCTGATGGGC 
TGCCTTGCAA TCGTCACCGC CATACCGTCG GAGGTGGCCT TCAACCTCAT CCCGGCCACG 
GTCTACGGGA CGTCGTTTGT CGCGCTCTAT GCCCTCGGGC ATCTCCTTCT TTCGCGGTGG 
CGGTGGCTCC CCCTCGCGCC CCTCCTCCTC GTCCCGCCGT CGGTCGTCTG GTTCCTCGCC 
GCGGGCGCCG ACCTCTATAA CGCGTTGCAG GACGCCAACT GGATCATTGC CGGCGCCCGG 
TTCGAGTTTC CGGCCTTCTC ACTCCTTCTC GGGAACGTCC ACGCCTTCGA GATGGCCGTG 
TTCAACCAGG CCTTCCTTCT CCTCCTCCTC GGGTTTGCAT GGTGCCGGTG GGGCGGGCTC 
GATCTTCGGG CGCGTGGGAC CCTCGCCCTT CTCCTGGCCC TCTCCATCGG CTCGATGCCG 
CTCCTCTCCT CCTGGGACGC CCTCGTCTAC GGCCCCATCG TCGCCGCCTT CCTCCTCGTG 
CTCTCTCTCC GCGACCGCTC CCCCCTCGTC GCCGCCGCCG TGGTCCCCGC GGTCGCCTTC 
CTCATCTATC TCCCCTACTA CCTGTACCTC GAACCCGCGG GTATCGGCGG GATCGGGTGG 
GGCCTTCCTC CCACCGACCC GCTCGCCTTC CTCGCGGTCT GGGGCGGGTT CCTCGCAATC 
GTCTACGCAG CCGTCGTCCG GGATATCCGG CGATTTCCGG TGGCGCTCGC CGTCGCCGTC 
CCGCCCCTCG TCGCCGGCTA CGCCGCGCTC GCGATTCTCC TGGTGCCGCT CGCCTACCTT 
CTCCTGCGGA GGCGTCACGC GTTCCCGGAC CTCCTCTGTA TCGCCGGTCT TTCGGTGCTC 
ATCTTCTGCG AGGTCTTCTA CCTTGAGGAG ATGCTCGGGG GCGACTACAG CCGGTTCAAC 
ACCATCTTCA AGTTCTACTT CGACGCCTGG ATCCTTCTCG GCACGGGCTC CCTCCTCCTC 
GCCGGGAAGT GGCTTGCAGG ACGGCGGCCG GCCCTCCCGG CGGGGCGGTG GCTTGCCGTC 
GCCGCAGCCG TCGCCCTCAT CGTCGCCCCG TTCGCTCTCG ACGTCGATAT CGGCCGGGGC 
CTCCTCGGGA TCGACTACCC CCCGGCGGGC TACACCACTC TGGACGGGCT TGCCTACCTC 
GAGGCCACGC GGCCGGGTGA AGCCGCGGCG ATCGACTTCC TCCGGACGCT CGACGGCGAT 
CACCGGATCG TCGAGGCGGA GAACGGCGAC TACGGCTACT ACTCGAGGGT CTCGTCTTTT 
TCCGGCATCC CGACGATTCT CGGGCAGATC GGCCACGAAC TGACGTGGCG GGGAAACGGC 
GCCTGGTACA CGGAGCGTCC GGCTGATATT CGGGCGATCT ATGAGAATCC GGAGGAGACC 
GTCGCGCTGA TGGAGAAGTA CAACGCGACC CTCCTCTACG TCGGCGAGCC CGAGCACGAG 
CGCTACGACG TCCGGCTGCC GGACCGGGAG CTTCGTCTCA TCTACGACGA GGGGGGTGTC 
AGGATATACG AACGGGGAGG GTAA 

 

Protein sequence

MELILQAYDV LLWAALLKGL QLALWPRLRP ALGDHAYPAA YPASLLLFAL ATWYCGLLRV 
PVALALLLFV GLAVYGIQRG DYRLGELRSL LFWDAVFLVG FLFALAVRFV NPPIGYFSEQ 
YMNHAFLASV IREPVVPPLD PWFAGGHLTV YYYLGHWLMG CLAIVTAIPS EVAFNLIPAT 
VYGTSFVALY ALGHLLLSRW RWLPLAPLLL VPPSVVWFLA AGADLYNALQ DANWIIAGAR 
FEFPAFSLLL GNVHAFEMAV FNQAFLLLLL GFAWCRWGGL DLRARGTLAL LLALSIGSMP 
LLSSWDALVY GPIVAAFLLV LSLRDRSPLV AAAVVPAVAF LIYLPYYLYL EPAGIGGIGW 
GLPPTDPLAF LAVWGGFLAI VYAAVVRDIR RFPVALAVAV PPLVAGYAAL AILLVPLAYL 
LLRRRHAFPD LLCIAGLSVL IFCEVFYLEE MLGGDYSRFN TIFKFYFDAW ILLGTGSLLL 
AGKWLAGRRP ALPAGRWLAV AAAVALIVAP FALDVDIGRG LLGIDYPPAG YTTLDGLAYL 
EATRPGEAAA IDFLRTLDGD HRIVEAENGD YGYYSRVSSF SGIPTILGQI GHELTWRGNG 
AWYTERPADI RAIYENPEET VALMEKYNAT LLYVGEPEHE RYDVRLPDRE LRLIYDEGGV 
RIYERGG