| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2301 |
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| Symbol | |
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| ID | 4848144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 2283888 |
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| End bp | 2284700 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640117011 |
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| Product | tRNA pseudouridine synthase ACD |
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| Protein accession | YP_001048206 |
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| Protein GI | 126180241 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGG CGTTCCGCTT CTCGTACTTC GGTGACCGGT TCTTCGGTTC GCAGATGCAG
CCCGATCTCT GCACCGTGGA GGGCGAGTTC ATCGGGGCCT GCAGGCTTCT TCGGCTCTTC
GACGACTGGA GGGAGGCGAA CTTCGCTACC GCCGGCCGCA CCGACCGCGG GGTGCACGCC
CGGTCCCAGG TCTGTTCGTT TTTGACCGAT AAGCCGGAGC GCGCGATCGA AGCGCTGAAC
CGGGTGCTCC CGGCAGACAT CTGGTGTACG GGGTGGGCCG AGGCCCCGGA CGGGTTTCAC
CCCCGGTATA GCGCCGTATC GAGGACATAC CGCTACTACT TCTCTGCCCC CGGTGATGCC
GCCGCCATGC ACGAGGCGGC GCAGGAATTT CTCGGGCGCC ACGACTTCTC GGCGTTCGCC
CGTGCCGGCG ACCGGAACCC CGAGCGGAGG ATCCTCGCAT CACGGGTCTT TATCGACGGG
GAGTTCGCCG TATTCGAGGT GACGGGCGAG AGTTTCCTCT GGAACATGGT CAGGTGCATG
GCAACGATGC TCGGACGGGT GGGAAGAGGC GAGGCCGAAG CCGGGGAGAT CGCACGGCTT
CTTACCGGGC CAGTGGAGCG GAGAGTCGCT GCGGCTCCTC CCGAAGGGCT GATCCTCTGG
GATATCGATT ACGGAATTCC CTTTACGCCC CTTCCGATCG ACGCCGGGAG CAGCCGGCAT
CTGGGCGACC GGCATCGCTA TCACGTCCTC ATGGCAAAAA TCTCCGCACA CCTCGCACAG
GATCACCGGC AGCCCGACAC ACCCGGAATA TAA
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| Protein sequence | MNLAFRFSYF GDRFFGSQMQ PDLCTVEGEF IGACRLLRLF DDWREANFAT AGRTDRGVHA
RSQVCSFLTD KPERAIEALN RVLPADIWCT GWAEAPDGFH PRYSAVSRTY RYYFSAPGDA
AAMHEAAQEF LGRHDFSAFA RAGDRNPERR ILASRVFIDG EFAVFEVTGE SFLWNMVRCM
ATMLGRVGRG EAEAGEIARL LTGPVERRVA AAPPEGLILW DIDYGIPFTP LPIDAGSSRH
LGDRHRYHVL MAKISAHLAQ DHRQPDTPGI
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