| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2212 |
|---|
| Symbol | |
|---|
| ID | 4848117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2203156 |
|---|
| End bp | 2204409 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640116920 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_001048117 |
|---|
| Protein GI | 126180152 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1503] Peptide chain release factor 1 (eRF1) |
|---|
| TIGRFAM ID | [TIGR00108] peptide chain release factor eRF/aRF, subunit 1
[TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGC CGCGAAAGCG CTACGAATTT AAGAAGATGC TTGAGAGGCT GGCGGAGAAG
GAAGGGAGCG GCACCGAGCT GATCACCCTG TATATACCTC CGGATAAGCA GATATACGAC
GTGACCGCCC AGCTCCGCGA CGAGTTCGGG CAGTGCGCCA ACATCAAGAG CAAGCAGACC
AGGACGAACG TCCAGAGTGC CATATCCTCC ATCCTCTCCC GCCTGAAATA CTATAAGCGC
CCGCCGGAGC ACGGCATGGC GGTCTTCTGC GGCACGATCA ACGTCGGCGG CGACCGCACC
GACCTCGACT GCGAGATCAT CGAGCCGCCC GAGCCGCTCA ACACCTACAT GTACCGCTGC
AGCTCCTCGT TCGAACTCGA GCCGCTGGAG CAGATGCTCG GGGAGAAAGA GGTCTACGGC
CTCATCGTCC TTGACAGAAG GGAAGCCTAC GTCGGGTTTC TCCGGGGCAG CCGGATCGAG
CCTGTCCGCG GAGTCACCTC GACCGTACCC GGCAAGCAGC GGAAAGGTGG ACAGTCGAGC
GTTCGTTTCC AGCGGCTGCG GCTGATCGCC ATCAACGAGT TCTACAAGAA GATCGGCGAC
CTCGCGAGCG AGGTCTTCCT CGCCGAGAAG GACTTCTTCG AGCGGTTCAA AGGCGTGCTG
ATCGGCGGCC CGACACCAAC CAAGGAGGAG TTCGAGGCCG GCGGTTTCCT CCACCACGAG
CTGCAGAAGC GGATCATCGG GCTCTTCGAC GTCTCCTACA CGAACGAGTC CGGGCTTGCC
GAACTCGTCG AGAACGCGTC GGATGCCCTG AAAGGCCTCG ATATCATCAA GGAGAAGGCC
GTGATGAACC GGTTCCTCCA GGAACTGGTC AAGGACGACG GAGCGGCCGC TTACGGGGAA
GAGAGTGTTC GAAAGAACCT GGAACTCGGT GCCGTCGACA CCCTCCTCCT CTCCGACAAA
CTCCGGAGAG CCCGGCTGAA ACTTGCCTGC CAGAACGGCG ATTACACCGA GGAGCGGACG
GTCAGCATCG AACCGGGCAA ACACATCAAA GACCTCGACC TCGGCACCTG CCCCAAAGAC
GGCGGATCGC TCTACGTGGC CGAAGAGGCC GATATCATCG ACGAACTGAC CACGCTCGCC
GACCAGAGCA GCACGACGGT CAGGATCATC TCGGACGACT TCGAAGAAGG TTCGATGCTT
TACAACGCAT TCGGCGGGAT CGCTGCAATC CTGCGCTACA GGACAGGATA CTAA
|
|---|
| Protein sequence | MDTPRKRYEF KKMLERLAEK EGSGTELITL YIPPDKQIYD VTAQLRDEFG QCANIKSKQT
RTNVQSAISS ILSRLKYYKR PPEHGMAVFC GTINVGGDRT DLDCEIIEPP EPLNTYMYRC
SSSFELEPLE QMLGEKEVYG LIVLDRREAY VGFLRGSRIE PVRGVTSTVP GKQRKGGQSS
VRFQRLRLIA INEFYKKIGD LASEVFLAEK DFFERFKGVL IGGPTPTKEE FEAGGFLHHE
LQKRIIGLFD VSYTNESGLA ELVENASDAL KGLDIIKEKA VMNRFLQELV KDDGAAAYGE
ESVRKNLELG AVDTLLLSDK LRRARLKLAC QNGDYTEERT VSIEPGKHIK DLDLGTCPKD
GGSLYVAEEA DIIDELTTLA DQSSTTVRII SDDFEEGSML YNAFGGIAAI LRYRTGY
|
|---|
| |