| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2170 |
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| Symbol | |
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| ID | 4846365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 2164524 |
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| End bp | 2165141 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640116878 |
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| Product | translation initiation factor IF-2 subunit beta |
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| Protein accession | YP_001048075 |
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| Protein GI | 126180110 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG1601] Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain
[COG3269] Predicted RNA-binding protein, contains TRAM domain |
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| TIGRFAM ID | [TIGR00311] translation initiation factor aIF-2, beta subunit, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCGT CATACGAAGA CCTTCTGAAG AAGGCGTATA CCAATATCAC GGAACCGACG
GAGTTCGAGG ACCGGTTCAC GGTTCCGACC GCCCGCGCCT TTATCGAGGG GAAGACCACG
GTTCTGGAGA ACTTCGCCGA GATCGCGAGT ACCCTCCGGC GCGAGCAGGA TCACCTGATG
AAGCATCTCC TCGGCGAGCT CGGTACTGCC GGCAAGGTGG AGGGGACACG TGCTGTCTTC
TCCGGGAAGT TCGAGCAGGA GCAGATCAAC ACGATCATCA AGGGCTACGT CGACGACTAC
GTCATCTGCT CGGAGTGCGG GAAGCCCGAC ACCCGTCTGG TCAAGACCGA GCGGGTTCTG
ACGCTCAAGT GCGACGCCTG CGGCGGTCAC CGGCCGGTGC GGAAGCGAAA AGCGATAGTC
GATCCCTCTG CAGCGTCGAA ACCGACCGAG GGCGCCATCA TGGACGTCAC CCCGCAGTTC
CTCTCGAAGC GCGGTGACGG CGTGGTGAAG ATCGATCGCT ACACGATGTA CGTTGCGAAT
GCAAAACCGG GCCAGACCGT GAAGATAAAG ATCACCCGGA TCGCCGGGAC GATCATCTTC
ACCGAGCGCG TGGACTGA
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| Protein sequence | MSPSYEDLLK KAYTNITEPT EFEDRFTVPT ARAFIEGKTT VLENFAEIAS TLRREQDHLM
KHLLGELGTA GKVEGTRAVF SGKFEQEQIN TIIKGYVDDY VICSECGKPD TRLVKTERVL
TLKCDACGGH RPVRKRKAIV DPSAASKPTE GAIMDVTPQF LSKRGDGVVK IDRYTMYVAN
AKPGQTVKIK ITRIAGTIIF TERVD
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