| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2162 |
|---|
| Symbol | |
|---|
| ID | 4847999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2156974 |
|---|
| End bp | 2157735 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640116870 |
|---|
| Product | regulatory protein, ArsR |
|---|
| Protein accession | YP_001048067 |
|---|
| Protein GI | 126180102 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3398] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCTGG TAGCGGTTGC CGATGCCACC GAATACACGG TCCGGCCCTC AAGAAACGTC
GGGCAAGAGC CCGGCATGTC CATATCGGGC GAGAAGGTGC AGGAGGTAGA CCCGATACCG
CTCTGGCTCT TTCTGCTGCT GTCTGTATTT CCCCAGTTGA CGGCAGCCCC GATCGAGACC
CTCATTCCGT TGAAGGCCGC CGGATACCTC GGGTACAAAC GGATTTGCAA AGAAAACGCC
CTTGAGAGTC CGCAGAGACG CAAGATCTTG AGATTTGTCA AGAGGAACCC GGGATTGCAC
TTCAGGGAGA TATTGAGGCG TGTGCCTCTG ACGCGAGGGA CGCTTGATTA CCATATGAAA
ACGATGGAAT CCGTGGGTCT CTTAAAGACG ATACTGGAAA GAGGGAGGAC TCATTACTTC
GTTGCAGGTG CCCCATACTC GGCCGAGGAG GAGAACCTCA TCATCGCACT GAGGAATGAG
AGTCTGCGGA GAATTATAAC AGAGATCTAT CTCAATCAAG GCGCATGCAA CGAAGAAATT
GCAGAAGACG TCGAGTTATC AGGAGTTACA GTTTATGAAC ACATACGATA CTTGGAAGAT
CTGGGTGTTG TGATCGCAGA GAGGGATGGG CGATGTGTGC GGTATACTCT CGCCGAGAAC
TATTCTCGTA TACTGATGGA TATGCGGACC CGCCTTAAAC CGGCCCGGAG CGCGGCAGAT
CCCGCTGGAT GGATCAGCCC CGGGGGTGTT CCCTCCCGGT AG
|
|---|
| Protein sequence | MLLVAVADAT EYTVRPSRNV GQEPGMSISG EKVQEVDPIP LWLFLLLSVF PQLTAAPIET
LIPLKAAGYL GYKRICKENA LESPQRRKIL RFVKRNPGLH FREILRRVPL TRGTLDYHMK
TMESVGLLKT ILERGRTHYF VAGAPYSAEE ENLIIALRNE SLRRIITEIY LNQGACNEEI
AEDVELSGVT VYEHIRYLED LGVVIAERDG RCVRYTLAEN YSRILMDMRT RLKPARSAAD
PAGWISPGGV PSR
|
|---|
| |