Gene Memar_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2102 
Symbol 
ID4846306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2089600 
End bp2090889 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content67% 
IMG OID640116811 
Productchloride channel protein EriC-like protein 
Protein accessionYP_001048009 
Protein GI126180044 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCAC CTGCAGACGG TCCGGCGCCG CCGGAAGAGC GGATCTGCGT TGAGCCCGGT 
AGCCGGGAAG GAACCCCAAA CCTCCGGCAG GTCGCCCTCA TCGCCGTAAT CGCGATCCTC
TTTACGGTCG CCTACCTCGC CCTCTACGGA CTGCTCAACA ACGTCGTCTG GTCTCAGAAC
AACTTCGTGC AGGCCAACCC CTGGGCGGTT CCGGCAGGCG TCCTCGCCTT CTCGCTGCTC
GTCGGCCTCT GCCGCAGGTA TCTGCACGCA CCCGACGTGA TCCATGGCGG GTTCGCCGAA
TCGCTCAGAG GCGGAGGCGA GAAACCCAAC TACCGGACGT TTCCCGGTGC CCTCCTCTCG
TCGCTCTTCT CGCTTCTCTC CGGGGCAAGC ATCGGGCCGG AAGGAACAAT CACCGTTCTC
ATCGGTTACG TCTCCTCGTA CGTCCGCGAC CGGCTCAGGA TCGGGTCCCC CGGGGCCGCG
CTCGGGTTCG ACGTCGCCGC TCTGGCATCG GCGTTCAACG GGATCGTCGG CAACGTGCTC
TTTACCGGGG TCTTCGCCAC CGAGTTCCAG ATCGGCGGAA ACAGGAACGC CTTCCGGTTC
CTCACCTGGA ACCTGCTCGC CGGCACCGTC GGTTACCTCT TCTACCTGCT CCTCGGGCTC
CCCTCCTTTG CGCGGAGCAT CCCGTTCGAG CCGATCGGCG AGCTGCATCC CGGCTACATC
CTCTGCGCGA TCGCCCTCGG GATCCTCGGA TCGCTGCTTG CGGTATTTGC AGGAGGCGCC
ATGCAGGCCG CCGGGACGGT CATGGACCGG ATATTCGGCG ACGCGCCCGT CGCCCGCGTC
CTCGCCGCCG GGGCGGTCAT CGCCTGCGTC GGCTACTTCA TCCCGGAGGT GCTCTTCTCC
GGGGAGGCCC AGATCCACGG GATCATCGCC GACCCGGCCC GGCTCGGGGT CGGGATGCTG
CTCGGCGTAG CGGTCTTGAA GATCCTCCTG CTCGCGCTCT CGTTCAAGAG CGGGTATATC
GGCGGCCCCC TCTTTCCCAT CATCTTCTCG TCCACCCTGA TCGGGCTCGC CTTAAACCTC
GCCTTCCCGG GCATCCCGCT CGGCATCTTC GTGCTCTGCA TCGAGGTCGC GGCCCTCACC
CTCGCCCTCG GGGCGCCCCT GACCTCCATC CTCCTGGTCG CGGTCGTGGG CACGGCCGAC
CAGTACACGG TCGTGCTCCT CGTGATCTCC GCCGTCACCG CCATGGTCAT CGCTGCCGCC
GTGAAGGAGA GAATGGGAGG GCAGCCGTAG
 
Protein sequence
MPAPADGPAP PEERICVEPG SREGTPNLRQ VALIAVIAIL FTVAYLALYG LLNNVVWSQN 
NFVQANPWAV PAGVLAFSLL VGLCRRYLHA PDVIHGGFAE SLRGGGEKPN YRTFPGALLS
SLFSLLSGAS IGPEGTITVL IGYVSSYVRD RLRIGSPGAA LGFDVAALAS AFNGIVGNVL
FTGVFATEFQ IGGNRNAFRF LTWNLLAGTV GYLFYLLLGL PSFARSIPFE PIGELHPGYI
LCAIALGILG SLLAVFAGGA MQAAGTVMDR IFGDAPVARV LAAGAVIACV GYFIPEVLFS
GEAQIHGIIA DPARLGVGML LGVAVLKILL LALSFKSGYI GGPLFPIIFS STLIGLALNL
AFPGIPLGIF VLCIEVAALT LALGAPLTSI LLVAVVGTAD QYTVVLLVIS AVTAMVIAAA
VKERMGGQP