Gene Memar_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2088 
Symbol 
ID4847153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2075897 
End bp2076625 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID640116796 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001047995 
Protein GI126180030 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCA CGCTGCTCGG GACCGGGGAC GCCATCGGGA CGCCGAAGAT TGGATGCGAC 
TGCGAGAACT GCCGGGCGAT GGTCGCGGCG GGGCGGTCAC GGCTCCGGAC GTCCTTCCTC
GTCGAGATTG AGGGCAAGCA CATCCTCATC GAGTCGTCCC CGGACCTCCG GCAGCAGCTC
CTCCGGGCCT CTTCCCCCCA TATCGACGCC GTCCTCTGGT CGCACGGCCA TTACGACCAT
TTCATCGGGT TCGGCGAGTT CTACCGGGTG CAGAAGGTGC CCCCGGCCTA CGCGGCGCCG
CCGGTGATGG ACTACTGCTC GGGCTACCTC CACTTCCTGC CGTTCGAGAA GCACCCGGTT
CCGGTCTACG AGCCGTTCGA CCTCTTCGGC GTGACGTTCA CGTTCTTTGA GGTGAACCAC
CCGCCGGTCT ACACCTGCGG GCTCCTCCTC GAGCACGACG ACGTGGCGGT CGCCTACACC
GCAGACACGC GGGAGGATAT CCCGGAAGCG AGCAGGGATC TCCTCCAAAA GGCCGACATC
GATCTCCTCT TCGTCGACGC CATCGCTCCC GAGGGCTATA ATATCACCAA GCACATGAAC
TACGTCGAGG CCGTCCGGTT CGCCCGCGGC GTCGGGGCGA GGGACTACCG GTGCGTCCAC
ATGAGCCACC TGGTTCCGCC GGGGATGCCC CACGCCGGGT ACGATATGGA GACGTTCTGC
TGGGAGTAG
 
Protein sequence
MQITLLGTGD AIGTPKIGCD CENCRAMVAA GRSRLRTSFL VEIEGKHILI ESSPDLRQQL 
LRASSPHIDA VLWSHGHYDH FIGFGEFYRV QKVPPAYAAP PVMDYCSGYL HFLPFEKHPV
PVYEPFDLFG VTFTFFEVNH PPVYTCGLLL EHDDVAVAYT ADTREDIPEA SRDLLQKADI
DLLFVDAIAP EGYNITKHMN YVEAVRFARG VGARDYRCVH MSHLVPPGMP HAGYDMETFC
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