Gene Memar_2043 details

Gene Information

• Locus tag: Memar_2043
• ID: 4847198
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 2036261
• End bp: 2036827
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640116752
• Product: hypothetical protein
• Protein accession: YP_001047951
• Protein GI: 126179986
• COG category: [S] Function unknown
• COG ID: [COG1300] Uncharacterized membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAGA CCTCGCTCGC CCGGGCCACG ATCTTCGCAG GCGCCCTCTT TGCCGTCTCT 
ATCGGCATCG GCATCGTTGC CGTGGTCCGC GACCCGGGCA TAGGTGCACA GGCCGTGACT 
CTCTTCAACG AGCAGGTGGT GGGCCAGCTC CTCTCCGACT CCCCGCCCGT CCTTGCCGGG 
AAACTTTTCC TGAACAACCT GGCTGCCTGC CTCCTCCTCT TCCTCGGGGG AGCCTCCCTC 
GGCGTGGTCA CGATGCTGAT CCTCTCGGTC AACGGACTGT TGATCGGTGC ATTGACGGAA 
CTCGTGCGGC AGCAGCAGGG TATGCTCTTC ATCGCGGCGG CGCTCGTCCC CCACGGCATC 
TTCGAGATCC CCGCCTTCCT CATCGCGGGG GGCCTCGGTC TCCTCCTCGG GAAGGAACTC 
GTCGCCGAAT GGCACGGCAC GGGCGATGCC GCTGCAGAAG CCCTGCCTCT CGCCCGGCTT 
TTTCTCCGGA TAGTCGTCCC GCTCCTCGCG GTTGCCGCGG TCGTAGAGGC ATTTATTACG 
CCGGCAATCC TAAGTATGAT AGCTTAA 

 

Protein sequence

MSETSLARAT IFAGALFAVS IGIGIVAVVR DPGIGAQAVT LFNEQVVGQL LSDSPPVLAG 
KLFLNNLAAC LLLFLGGASL GVVTMLILSV NGLLIGALTE LVRQQQGMLF IAAALVPHGI 
FEIPAFLIAG GLGLLLGKEL VAEWHGTGDA AAEALPLARL FLRIVVPLLA VAAVVEAFIT 
PAILSMIA