Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2003 |
Symbol | |
ID | 4847719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1989146 |
End bp | 1991521 |
Gene Length | 2376 bp |
Protein Length | 791 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640116709 |
Product | type II secretion system protein E |
Protein accession | YP_001047911 |
Protein GI | 126179946 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTGC CGTTCCAGTC CCCGGAAGAG GATGTGCGGG AAGAGACGGT TCCGGAGGAG GTTGCAGAGC CCGTTACCGA TGATATGAAC GAGCAGCCGG AGCCTTCGCC AGTGCAGGAG CAGAAGAGCG CGGAGATCCC GCAAAAGAGC GGGGGGATCC GTTCGCTCAT CGACACGGTG GCGAGGTCGG GCGACACCGC CGCACCGCGT GCAGCCGGCA GCAGAGATCC GGTCAGGGCG CTCCTCGACC GGATCGGTCG GGGCAAGGGG GGCAGCGCCG AAGAGGTCGT GTCCACCCCG ATGGTAGAGA CACACGATCT CCATGCGGAG CCGAAGATGC CGGGCGATCC GCCGGCGGCG GTTGAGGATT TCGGGGCGGA GCAGGATGTG CCGGCTTCTT CCCCCGGGAA CCATACCCCT GCGGGAATCC TCGATCGGGT GAAAGGGTGG AGTGAGGGTG ATGAATCCGG CACCCCCAAA CCGAAACCCC GCGTTGTGGG AGACGTCGAT GATCCCGGAA TCGGAGGAGA TCTATCCGAC GGCGTGGTAA CGGTAGAGGA GCTCGGGAAC CTGGCGGATC TGATCCTCCC GAAGAGCGCG ACGTTCACGA TCGATGAACT GAGCATCAAC CGCAATGAGC ACCATTTTGA TTTCGTCGAC AATGCCAGGG TCGTGTCGGA GTTCGACGAT ATCTTCTCCC AGTCCCTCTC CTCCACTTCA CTTGCTGCGG CTGCCGCACA GGTGGTGACC CCCGCCGAAG AAGTTCCGCA GCCCCGGTTC GGATTCCTCA AAAAGATCCA GGTGCCGAAA GTCGGCGCCG TGGTCGAGGA GTACAACCCT GCGTTCCACG GTCAGCTCGT CGAGCTCACG ATGCGACCGT CACCGGGGGT GGAGGAGATC GAGCTCTACC CGGTGAACGA ACCGTATGCC TATGTCCGGG TGACCTACGA CAGCACGACG CACGAGTACA CCTATAACGT CATCGAGCCC GTGCTCACGC CCGGGGAGGA GCAACTCTTT TCGGAGATCA AAGAGCGGCT CTTTGAGACG CTCAACATTA CTTCCCGTGA CCTCACCCGT GACGAAGCGA GGACAGCGCT CCGCGAAGCG GCGAACATGA TCATCGCCGA CTACGGAATC CGCCTCGAGC CTCTCGGGCG GGAGAAGATT CTCTATCACG TTGAGAAGGA GTTCCTCGGC GACGGGCTGA TCGACCCGGT GATGCACGAC AAGTACATCG AGGATATCTC CTGCGACGGC GTGGACAGTG CCATATTCGT CTATCACACG ACCTACGAAT CGATGAAGAC GAGCCTCGTC TATCACGACG CCGTGAGTCT CGACTCGTTC GTCACGAAAC TTGCGCAGCG GGCCGGGAAA TACATCTCGA TCGCCGAGCC GATGCTGGAT GCCACGATGA GCGACGGATC GCGTATCCAG ATGACGCTCG GGGCGGAAGT GACCGCTCAC GGTTCGACGT TCACGATCCG TAAGTTCCGG GAGGAGCCGA TCACGCCGAC AGATCTTATC GAGTGGCACA CCTTCTCGCC GCTTGGGATC GCCTTCATCT GGCTCGCGGT CGAGAACGCC AAGTCCTGCA TCTTTGCCGG CGGGACGGCG TCCGGAAAGA CGACGACCCT GAACGCCGTA TCGCTCTTCA TCCCGCCGCT GGCAAAGATT GTCACCCTCG AGGATACCCG GGAACTGAAA CTGCCTCACC CGAACTGGAT CCCGAGCATC ACCCGGGACT CGTTCTCGCA GGACGGGCGC GGCGAGATCG ATATGTACGA ACTCCTGCGT GCTGCGCTCC GGCAGCGTCC GGAGTACATC CTGGTCGGTG AGGTCCGTGG CAAGGAGGCC CTGACCCTCT TCCAGGCGAT GAGCACCGGT CACGTCACCT ACGCGACGAT GCACGCCGAC TCGGTGGCAA GCGCCGTCCA CCGTCTGGAG AACCCGCCGA TAGACGTGCC GAGGAACATG CTCTCTGCAC TGAACCTGAT GTCCATCCAG GTGCAGGCCC GTATAGGCGG TCAGCGGATC CGGCGGAACA AGCAGCTCAT CGAGATCCTG GATATCGATC CCCGGACGAA CGAACTGATC ACGAACGAGG TCTTCCGGTG GCATCCGGCA ACCGACGAGA TCCGGTATTC CGGCAAATCC TACATCCTCG AACAGATCAT GGAAGACCGG GGCTGGAGCG AGGAGCGGAT GCGTGAAGAG CTGAAACGCC GGCAGGAAGT CCTTGAATGG ATGCGTATCA AGAAGATTCG CCATTTCAAG GACGTGAGCA AGATCCTGGT CTCCTACTTC CGCGATCCGG AGACGGTCGT TCAGCGGGTG CGTGCCGACC TCTACGGGGA GGGTGGTTCC GCATGA
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Protein sequence | MGLPFQSPEE DVREETVPEE VAEPVTDDMN EQPEPSPVQE QKSAEIPQKS GGIRSLIDTV ARSGDTAAPR AAGSRDPVRA LLDRIGRGKG GSAEEVVSTP MVETHDLHAE PKMPGDPPAA VEDFGAEQDV PASSPGNHTP AGILDRVKGW SEGDESGTPK PKPRVVGDVD DPGIGGDLSD GVVTVEELGN LADLILPKSA TFTIDELSIN RNEHHFDFVD NARVVSEFDD IFSQSLSSTS LAAAAAQVVT PAEEVPQPRF GFLKKIQVPK VGAVVEEYNP AFHGQLVELT MRPSPGVEEI ELYPVNEPYA YVRVTYDSTT HEYTYNVIEP VLTPGEEQLF SEIKERLFET LNITSRDLTR DEARTALREA ANMIIADYGI RLEPLGREKI LYHVEKEFLG DGLIDPVMHD KYIEDISCDG VDSAIFVYHT TYESMKTSLV YHDAVSLDSF VTKLAQRAGK YISIAEPMLD ATMSDGSRIQ MTLGAEVTAH GSTFTIRKFR EEPITPTDLI EWHTFSPLGI AFIWLAVENA KSCIFAGGTA SGKTTTLNAV SLFIPPLAKI VTLEDTRELK LPHPNWIPSI TRDSFSQDGR GEIDMYELLR AALRQRPEYI LVGEVRGKEA LTLFQAMSTG HVTYATMHAD SVASAVHRLE NPPIDVPRNM LSALNLMSIQ VQARIGGQRI RRNKQLIEIL DIDPRTNELI TNEVFRWHPA TDEIRYSGKS YILEQIMEDR GWSEERMREE LKRRQEVLEW MRIKKIRHFK DVSKILVSYF RDPETVVQRV RADLYGEGGS A
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