Gene Memar_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1959 
Symbol 
ID4848113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1955126 
End bp1955689 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content59% 
IMG OID640116665 
Producthypothetical protein 
Protein accessionYP_001047867 
Protein GI126179902 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1491] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.701597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCG AAAGGAAAGA GGAGAATGCG GTAGTCATCG ATGTCCTCCC CATGGGGTAC 
GTGAGCGAGC AGCGCCCGGC CTACAAGCGT GAGCCGGTCG TCCAGGCGGT TGGCGTGGAC
CAGTTCAAGT TGCTCGAGCT CATCCCGAAG CAGGGTGCGG ATATCCAGAT CTACGACCGC
GTCTATATCG GCGATGCTGA GCGGGAGAAG ATCGAGCGCG TCAAGCGGCG GATCAGTCAC
AGTGACCTGA CGGCGACGGC GAAACTCGAA CTGCCGTTCG TGGTCGAGGA GATCGTCCGC
GAGAACGAGC CGCGGTTCGT CGATTTCTTC AACAGGTCCG TGCCCATCAC GCCGAAGTTT
CACATGCTGC ACCTGCTTCC CGGCATCGGG AAGAAACTGA TGTGGGAGAT CATCGAACAG
CGCGGGAAGA AGCCGTTCGA GAGTTTCGCC GATATCTCCG GGCGGATCAA GTCGCTCCCG
CACCCTGATC GAATGATTGT CAGCCGGATC CTGCGCGAGA TCGAGGACCC GGACGAGAAG
TATCACGTCT TCACATCGAG ATGA
 
Protein sequence
MKTERKEENA VVIDVLPMGY VSEQRPAYKR EPVVQAVGVD QFKLLELIPK QGADIQIYDR 
VYIGDAEREK IERVKRRISH SDLTATAKLE LPFVVEEIVR ENEPRFVDFF NRSVPITPKF
HMLHLLPGIG KKLMWEIIEQ RGKKPFESFA DISGRIKSLP HPDRMIVSRI LREIEDPDEK
YHVFTSR