Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1959 |
Symbol | |
ID | 4848113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1955126 |
End bp | 1955689 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640116665 |
Product | hypothetical protein |
Protein accession | YP_001047867 |
Protein GI | 126179902 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1491] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.701597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACCG AAAGGAAAGA GGAGAATGCG GTAGTCATCG ATGTCCTCCC CATGGGGTAC GTGAGCGAGC AGCGCCCGGC CTACAAGCGT GAGCCGGTCG TCCAGGCGGT TGGCGTGGAC CAGTTCAAGT TGCTCGAGCT CATCCCGAAG CAGGGTGCGG ATATCCAGAT CTACGACCGC GTCTATATCG GCGATGCTGA GCGGGAGAAG ATCGAGCGCG TCAAGCGGCG GATCAGTCAC AGTGACCTGA CGGCGACGGC GAAACTCGAA CTGCCGTTCG TGGTCGAGGA GATCGTCCGC GAGAACGAGC CGCGGTTCGT CGATTTCTTC AACAGGTCCG TGCCCATCAC GCCGAAGTTT CACATGCTGC ACCTGCTTCC CGGCATCGGG AAGAAACTGA TGTGGGAGAT CATCGAACAG CGCGGGAAGA AGCCGTTCGA GAGTTTCGCC GATATCTCCG GGCGGATCAA GTCGCTCCCG CACCCTGATC GAATGATTGT CAGCCGGATC CTGCGCGAGA TCGAGGACCC GGACGAGAAG TATCACGTCT TCACATCGAG ATGA
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Protein sequence | MKTERKEENA VVIDVLPMGY VSEQRPAYKR EPVVQAVGVD QFKLLELIPK QGADIQIYDR VYIGDAEREK IERVKRRISH SDLTATAKLE LPFVVEEIVR ENEPRFVDFF NRSVPITPKF HMLHLLPGIG KKLMWEIIEQ RGKKPFESFA DISGRIKSLP HPDRMIVSRI LREIEDPDEK YHVFTSR
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