| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1947 |
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| Symbol | |
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| ID | 4846494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1941241 |
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| End bp | 1942362 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640116653 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001047855 |
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| Protein GI | 126179890 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.633607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCACC GAGTAGCCGC AATCGGCGGG GACGGTATCG GCCCCGAGAT CGTCGCGGCG
GGAAAGGATG TCCTTGATGC CGCAGGAGAA CGCTTCGGGT TCGATATCGC GTGGACCGAC
TTCGATATCG GGGCCGACCG CTACCTCGCG ACCGGCGATC TCCTGACCGA AGAGGATATC
CGGGGACTCT CGAAGTTCAA CGCGATCTAC TTCGGGGCGA TCGGCGATGA CCGGGTGAAG
CCCGGGATCC TCGAGAAGGG CATCCTGCTT GCGATCCGGT TCCACTTCGA CCAGTTCATC
AACCTCCGGC CGATCAAACT CCTCGACGGC GTGGCAACGC CGCTCGCGAA CAAGGGTCCG
CAGGACATCG ACTTCGTCGT CGTCCGGGAG AACACCGAGG ATTTCTACGT CGGGATCGGC
TCCCGGTTCG CCGGACGGCG CGAGCAAAAG ACCCTCGATG TCGTCCGCGA CATCTACAGC
GTCAGGTTCG GCCTCGATGT CGAGACCGAC GCCGAAGAAC TCGCCTACCA GATCGGCGTC
GTCACGCGAG AGGGTGCGGA GCGGGCGATC CGCTATGCCT TCGACCTTGC CGCAGCGAGG
GAGAAGAAAC TCACTTCGGT CGACAAAGCA AACGTCCTCT CCGACGTCTA CGGCCTCTGG
CGCGACGTCT TCACGGACGT CGCCGCCGGC TACCCGGACG TTAAGACGGA GTTCAACTTC
GTCGACGCCG TCACGATGTG GTTCGTCAAG AACCCCGAGT GGTTCGACGT CGTCGTCACG
CCGAACATGT TCGGCGACAT CATCACCGAC CTCGGCGCCA TGATCCAGGG CGGGCTCGGC
CTCGCCCCCG GCGGGAACAT CAACCCGAAC GGGACCTCCA TGTTCGAGCC CATTCACGGC
TCCGCGCCGA AGTACCGGGG CCTCGACGTC GCGAACCCGC TCGCGACCGT CTGGGCGGGC
TCGATGCTCC TCGACCACAT CGGCGAGCAC GAGGCGGCGG CGGCGGTTCT CCGGGCGATC
GAGCGAAGCA TCCTCGACGG GTTCGTCACC CGGGATATGG GCGGCGCGAA GAAGACGAGC
GAGGTCGGGC GCTACCTCGC GACGCTTGTG AAGACGGTGT AG
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| Protein sequence | MQHRVAAIGG DGIGPEIVAA GKDVLDAAGE RFGFDIAWTD FDIGADRYLA TGDLLTEEDI
RGLSKFNAIY FGAIGDDRVK PGILEKGILL AIRFHFDQFI NLRPIKLLDG VATPLANKGP
QDIDFVVVRE NTEDFYVGIG SRFAGRREQK TLDVVRDIYS VRFGLDVETD AEELAYQIGV
VTREGAERAI RYAFDLAAAR EKKLTSVDKA NVLSDVYGLW RDVFTDVAAG YPDVKTEFNF
VDAVTMWFVK NPEWFDVVVT PNMFGDIITD LGAMIQGGLG LAPGGNINPN GTSMFEPIHG
SAPKYRGLDV ANPLATVWAG SMLLDHIGEH EAAAAVLRAI ERSILDGFVT RDMGGAKKTS
EVGRYLATLV KTV
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