Gene Memar_1944 details

Gene Information

• Locus tag: Memar_1944
• ID: 4848128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 1937235
• End bp: 1939274
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640116650
• Product: hypothetical protein
• Protein accession: YP_001047852
• Protein GI: 126179887

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.540087
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAAACA GATCTCTTGT ACGAATCATG GGTCTTGGCA TGATCCTGAT GCTCATGCTC 
ATCCCGGTAT CGCCTGTCCT CGCCGCGGGG TTCGAATCAC CCTTCCCGGC GAGCGCAACG 
ACTGTTAAGC CTGTCGAGAG GCCGGATATG ACGTCTGTCT CCTCCGCCCT CTGCGAAGTC 
TTCGGGATCG AGTGCGACAG GGCCACGATG GCGAAAGGCG TCTATATCGA CCCCGGCGTC 
TGGGAATTCT CGCCGCAGTG GACGCTGATC ATGCTCGGCT CGACGAAGCA GCGGGGCGAC 
GTGCTGAAGT TCGTCGACGG GCTCGAGGCC TCGAAGGAGG AGAAGACCGC CTGGCGATCG 
AGCCTTGAAG AACTCTGGAA GGAGTACCCG GTCCGGGCCG TGAAGACGGA AGACGGCCTT 
GCGCTGACCA TCGTCCCCGA GAAGAGCGAT GTGCGGCTTG AAGTGTCCGA AAATTCAGCA 
CTCCGGGAAC TCGACGAGGA GATCGGCCGT GCGATGGCAT CGAGCATGGA CGGTGAAGTC 
GGCGTACGGT GGAATGCAGA TACTCATGGG TGGATTATCA AGGCGGCATG CGTGCATAAC 
TCAGTTAATG AGACAAATGC AGATATAGCA GCAGAACATG CATATGAGCC AGATTGGTGG 
TATGAAGGTT CAGAGTTTGA GATAATTCTC CAGCGCTGCT ACAACCACGG CTACGTTCCT 
CCCTCACCTA CCCCTCCAAT TCCCGGTGTC CCGACGGGAT TCGGCGCAGC CCCCGAGAAC 
TGCCAGAAGA ACGCAACCGA TGCGGCGACC GCCTACTACA ATAACCGTCT CGACGACGCT 
TTCACGTCTC TCGGACATTC GAGCCACTTC ATGACCGATA TCGGCAACCC GATGCACACG 
GGAAACCTCT TCGTGCAGGG CTCCCTGACT GTCATGGGGT GGAACATTCA CAGTGCATAT 
GAAAACTACA CGCAAGACAA CTGGGTTGCG CTCGGGTTCG GCGAGCTCGT CGATAACACC 
GTAGAGACAG AAGTATGGGT GACGCCCGAT TACTCGACGC GGCTCCTCGG CTGGAAGACC 
CAGTGGGTCC GCGACCCCCT CATCCTCCTG GTCACCCTGA ACTATCTAAC TCACGGCGGA 
GAGTTCCACC TCGAAGAGAG CCCCGCAATC CGTGAAATCA CGCTATGGAC CCTCGGCGAA 
ACGACAAAGC ACACCAACGG CCTCGTGTAC TACGTCATCA AGGACGGTAT CCGCACCCAC 
GTCATCACCG CAACCGCGGG CCCGCACGGC TCCATCTCGC CCTCGGGCGA CGTCCAGGTT 
CTCTACGGTG AGGAGCAATC GTTTACGATC ACTCCCGATA GCGGCTATAC CGTGGACGAC 
GTCGCCGTGG ACGGCGAATC CGTCGGAGCC CGCACGACCT ACACCTTCGA GGGAGTAGAC 
GCGGATCACA CCATAGCAGC TACCTTTAAA GAACCCTCTG CCGCCTCCAG CGAATGGATC 
TGGTCGAGAG ATGGATGGGA CGGATGGTCT CACGAGGCAA CATGGTCGGG AACACAGACC 
GGACCCTGCT CCGAATACGG CCCGGTGATC GTCGATGATC ACGGCGAGCA CGGGACTAAT 
GCAAACCTTA GCGCCGGTTC GACGACCGCA CGTGTCGAGC GGCAGTTCAC GGATGCTTCG 
GGGAATGGGT GGAACACCCT CACGTTCACC GGCCTCCTGG CGGAATCGGA CGTACCCCGC 
GGGCGGTGGA TGATCATCGA GGTGAACGAC CAGCAGGTCT TCGCGGGCAC CGCCTCGCAG 
GTACCCCCGG GCAACGGTCA GATGTTCGAG ATCACCGTTC CGTTCCCGCA GTCGGACGAG 
GTGAATGTCA GGATTTCCCA TGGGCAGGAT CCGGCATGGG GTCCGCGGTT TGCAATGCAG 
TACCACTCCC TGAACCTGAC GCTGGACGGC AACCAGAGAG GCGCCGCTAT GGGAGATACG 
CCCTTCGTCC TACCTGACCC CGCCTCATTG GTGCTCAACG GAACCGCCGG GAGCCCCTGA 

 

Protein sequence

MVNRSLVRIM GLGMILMLML IPVSPVLAAG FESPFPASAT TVKPVERPDM TSVSSALCEV 
FGIECDRATM AKGVYIDPGV WEFSPQWTLI MLGSTKQRGD VLKFVDGLEA SKEEKTAWRS 
SLEELWKEYP VRAVKTEDGL ALTIVPEKSD VRLEVSENSA LRELDEEIGR AMASSMDGEV 
GVRWNADTHG WIIKAACVHN SVNETNADIA AEHAYEPDWW YEGSEFEIIL QRCYNHGYVP 
PSPTPPIPGV PTGFGAAPEN CQKNATDAAT AYYNNRLDDA FTSLGHSSHF MTDIGNPMHT 
GNLFVQGSLT VMGWNIHSAY ENYTQDNWVA LGFGELVDNT VETEVWVTPD YSTRLLGWKT 
QWVRDPLILL VTLNYLTHGG EFHLEESPAI REITLWTLGE TTKHTNGLVY YVIKDGIRTH 
VITATAGPHG SISPSGDVQV LYGEEQSFTI TPDSGYTVDD VAVDGESVGA RTTYTFEGVD 
ADHTIAATFK EPSAASSEWI WSRDGWDGWS HEATWSGTQT GPCSEYGPVI VDDHGEHGTN 
ANLSAGSTTA RVERQFTDAS GNGWNTLTFT GLLAESDVPR GRWMIIEVND QQVFAGTASQ 
VPPGNGQMFE ITVPFPQSDE VNVRISHGQD PAWGPRFAMQ YHSLNLTLDG NQRGAAMGDT 
PFVLPDPASL VLNGTAGSP