| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1933 |
|---|
| Symbol | |
|---|
| ID | 4846969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1927169 |
|---|
| End bp | 1928359 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640116639 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001047841 |
|---|
| Protein GI | 126179876 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0426] Uncharacterized flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.837392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAC GCGAGATCGT GCCGGGCGTC TTTGCCGTCG GCGCCATTGA CTGGGACCGC
CGGCTCTTCG ACGAACTGAT CCCGCTCCCC GACGGCACCA CCTACAACAG CTACCTGGTG
CGGGGCAGCA AGAAGACAGC GCTGATCGAC ACCGTCGACC CGACGAAGAC AGCGGAGCTC
ATGGGGAACC TGGAGTCGAT CGGGGTCGAG AAGATCGACT ACATCGTCTC CAGCCACGCC
GAGCAGGATC ACTCGGGCTC GATACCCGCA ATGCTCGAAC GGTTCGGCGA CGCGAAGGTG
GTGACGAACC AGAAGTGCCG CGACTTCCTG ATCGACCTCC TCCATGTCCC CGAGGATCGG
TTCATCGTCA TCGGCGACGG CGATACGCTC GACCTCGGGG GAAGAATGTT CGAGTTCATC
ATCGCCCCCT GGGTTCACTG GCCGGAGACG ATGCTGACCT ACCTCAAGGA AGACCGGATC
CTCTTCCCCT GCGACCTCTT CGGCTCGCAC TACGCGACGA GTTCCCTCTA CGTCCTCGAC
GAGGGCGTGG TCTACGAGTC CGCGAAACGC TACTACGCCG AGATCATGAT GCCGTTCCGC
TCGAGCATCA AGGCGCACCT TGCAAAACTC GCGACACGCG AGATCGACGT GATCGCCCCG
AGCCACGGGC CGGTATACGA CCACCCGGCG TTCATCGTCG ACGCCTACCG GGACTGGACG
GGCGACGCCG TGACGAATAC GGTGGTGCTG CCGTACGTCT CCATGCACGG AAGCACCCAG
GCGATGGTAG ACCACTTCGT CGACGCCCTG ATGAAGCGCG GCGTCGAGGT CCAGCCGTTC
AACCTCCCGA AGACCGACAC CGGCGACCTC GCAAAGGCGC TCGTGGACGC CGCAACGGTC
GTGATCGGGG CGCCGACGGT CATCTTCGGC CCGCACCCGC AGGCGGTCTA CGCTGCCTAC
CTCGCAAACC TCCTCCGCCC GAAGACCCGT TACGCGACGG TGATCGGGTC GTACGGCTGG
GGCGGAAAGA CGGTCGACAC CATCGTGGAG ATGCTCGGCC GGCTCAGGGT CGAGTTCCTC
GATCCGGTCT ACATCAGGGG TGCCCCGAAG GAGGAGAACT TCGCGGAGCT CGACCGGCTC
GCCGACGAGA TCGCAAAGAA GCACCGGGAG GCGGGGATCC TCTCCCCCTA G
|
|---|
| Protein sequence | MAAREIVPGV FAVGAIDWDR RLFDELIPLP DGTTYNSYLV RGSKKTALID TVDPTKTAEL
MGNLESIGVE KIDYIVSSHA EQDHSGSIPA MLERFGDAKV VTNQKCRDFL IDLLHVPEDR
FIVIGDGDTL DLGGRMFEFI IAPWVHWPET MLTYLKEDRI LFPCDLFGSH YATSSLYVLD
EGVVYESAKR YYAEIMMPFR SSIKAHLAKL ATREIDVIAP SHGPVYDHPA FIVDAYRDWT
GDAVTNTVVL PYVSMHGSTQ AMVDHFVDAL MKRGVEVQPF NLPKTDTGDL AKALVDAATV
VIGAPTVIFG PHPQAVYAAY LANLLRPKTR YATVIGSYGW GGKTVDTIVE MLGRLRVEFL
DPVYIRGAPK EENFAELDRL ADEIAKKHRE AGILSP
|
|---|
| |