| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1929 |
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| Symbol | |
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| ID | 4846532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1922788 |
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| End bp | 1923531 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640116635 |
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| Product | MIP family channel protein |
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| Protein accession | YP_001047837 |
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| Protein GI | 126179872 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCATAT CTCTTGGAAA ACGATGCGTC GCCGAAGCCG TCGGGACGTT TATCCTGGTC
TTCTTCGGTG CCGGCGCCGC GGTCGTCACG CTGATGCTCG CCGCGGGGAC GACCCCGGCG
ACCCCCTTCA ACATAGGGAT CGGGGCGCTC GGGGGACTCG GCGACTGGCT CGCGATAGGG
CTCGCCTTCG GCATCGCCAT CGCCGGCTCG ATCTACGCCT TCGGGCGAAT ATCGGGCTGC
CACATCAACC CGGCGGTGAC GATAGCCCTC TTTGCAACCC GCCGGCTCCC CGGCCGCGAC
GTCGTCCCGT ACATCGCCGC GCAACTGATC GGCGCCGCGG CGGCAAGCCT GCTCTTCGCC
TGGGCCGTCG GCCCGGACGC CGTAACCATC GGGGGCCTCG GGGCGACGGC ACCTTTTGTC
GGCATCGGCT ACCTGCAGGC AATCGTCATC GAGGCGATCG GGACGTTCCT TCTGATGCTC
GTCATCATGG GCGCCGCCGT TGACGAACGG GCCACGCCGG GCTTTGCCGG GCTTGTTGTG
GGTCTCGCGG TCGCGGGGAT CATCACGACG ATCGGGAACC TGACCGGCGC GTCGCTGAAC
CCCGCCCGTA CGTTCGGCCC CTACCTCGGG GACTGGCTTT TAGCAGGCCA GAACCTCTGG
GAGTTCTTCC CCATCTACAT CATCGGCCCC ATCGTCGGTG CGGTGCTCGC CGCATTCCTC
TACGACTACG TCTGCTGCGA ATGA
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| Protein sequence | MTISLGKRCV AEAVGTFILV FFGAGAAVVT LMLAAGTTPA TPFNIGIGAL GGLGDWLAIG
LAFGIAIAGS IYAFGRISGC HINPAVTIAL FATRRLPGRD VVPYIAAQLI GAAAASLLFA
WAVGPDAVTI GGLGATAPFV GIGYLQAIVI EAIGTFLLML VIMGAAVDER ATPGFAGLVV
GLAVAGIITT IGNLTGASLN PARTFGPYLG DWLLAGQNLW EFFPIYIIGP IVGAVLAAFL
YDYVCCE
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